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protein_US1
Euk-VirCercopithecine_betaherpesvirus_5
protein_US1__YP_004936113__Cercopithecine_betaherpesvirus_5__50292
Identity
- Accession:
- YP_004936113 ↗
- Protein ID:
- protein_US1
- Kingdom:
- euk
Quality
58.6
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Cercopithecine_betaherpesvirus_5
TaxID: 50292
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-46_60-90
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02957.22 best | TT_ORF2-like | 45.8 | 6.80e-12 | 57.1% | 60.4% |
| PF02957.22 | TT_ORF2-like | 38.2 | 1.70e-09 | 50.8% | 50.9% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 49.0 | 4.28e-01 | 82.5% | 62.5% |
| 3k1rA01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.60 | 47.0 | 4.41e-01 | 88.9% | 91.4% |
| 4a64A01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.59 | 50.0 | 3.96e-01 | 96.8% | 56.8% |
| 3evyA00 | 1.20.58.910 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 48.0 | 4.38e-01 | 92.1% | 81.9% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 40.0 | 3.86e-01 | 82.5% | 74.0% |