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protein_pr
Euk-VirMercadeo_virus
protein_pr__YP_009259278__Mercadeo_virus__1708574
Identity
- Accession:
- YP_009259278 ↗
- Protein ID:
- protein_pr
- Kingdom:
- euk
Quality
83.8
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Orthoflavivirus›
Mercadeo_virus
TaxID: 1708574
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-73
Domain cluster:
rep: uncovered_polypeptide_truncated_polyprotein__YP_009268598_0-711__Nakiwogo_virus__667516__D125-215
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c5xC00 | 2.60.260.50 | Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Flavivirus polyprotein propeptide domain | 0.69 | 61.0 | 5.91e-01 | 100.0% | 86.4% |
| 1iv8A02 | 3.30.1590.10 | Alpha Beta › 2-Layer Sandwich › Maltooligosyl trehalose synthase, domain 2 › Maltooligosyl trehalose synthase, domain 2 | 0.53 | 32.0 | 2.75e-01 | 88.9% | 35.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2721993 | 67.1.1.2 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep | 0.67 | 56.0 | 5.56e-01 | 100.0% | 87.0% |
| 2720279 | 67.1.1.2 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep | 0.65 | 58.0 | 5.18e-01 | 100.0% | 70.3% |
| 3934657 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 28.0 | 3.61e-01 | 88.9% | 88.6% |
| 4449307 | 375.13.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain | 0.54 | 31.0 | 3.39e-01 | 87.5% | 68.3% |
| 3853965 | 5.1.4.534 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CATSPERB_C | 0.53 | 45.0 | 3.34e-01 | 100.0% | 93.6% |
| 3415621 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.50 | 37.0 | 4.02e-01 | 87.5% | 95.0% |