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protein_pr

Euk-Vir

Lammi_virus

protein_pr__YP_009268586__Lammi_virus__649187

Identity

Accession:
YP_009268586 ↗
Protein ID:
protein_pr
Kingdom:
euk

Quality

78.9 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Lammi_virus

TaxID: 649187

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-81
PDB
Domain cluster: rep: propep__YP_009553725__Kampung_Karu_virus__2045186__D2-68
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01570.23 best Flavi_propep 86.1 1.90e-24 95.0% 87.5%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c5xC00 2.60.260.50 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Flavivirus polyprotein propeptide domain 0.94 88.0 8.83e-01 100.0% 97.5%
4bdxA00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.63 32.0 3.17e-01 88.7% 44.6%
2wj6A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 41.0 3.09e-01 73.8% 43.6%
2cg7A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.58 31.0 3.79e-01 87.5% 87.0%
6y2kA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 31.0 3.67e-01 91.3% 86.0%
1f8uA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 47.0 2.91e-01 98.8% 34.1%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.53 43.0 3.18e-01 91.3% 94.8%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 35.0 3.50e-01 91.3% 70.0%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2720279 67.1.1.2 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep 0.94 89.0 8.11e-01 100.0% 79.2%
2721993 67.1.1.2 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep 0.92 80.0 8.23e-01 97.5% 94.8%
2410038 67.1.1.2 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep 0.90 82.0 8.25e-01 100.0% 96.2%
4418856 223.2.1.23 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 0.56 40.0 3.12e-01 76.2% 50.0%
3740938 223.2.1.34 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 0.56 40.0 3.27e-01 77.5% 54.5%
3685389 223.2.1.23 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 0.55 40.0 3.11e-01 77.5% 44.9%
3168866 223.2.1.34 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 0.55 39.0 3.18e-01 75.0% 50.6%
3549751 223.2.1.23 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 0.55 40.0 3.04e-01 78.8% 42.9%
3930154 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 39.0 3.13e-01 76.2% 44.8%
3275859 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 3.53e-01 97.5% 85.5%
4429732 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 40.0 2.81e-01 87.5% 35.2%
3921143 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 37.0 3.09e-01 77.5% 47.3%