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putative_2A
Euk-Virtremovirus_B1
putative_2A__YP_009553713__tremovirus_B1__2058161
Identity
- Accession:
- YP_009553713 ↗
- Protein ID:
- putative_2A
- Kingdom:
- euk
Quality
46.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Picornavirales›
Picornaviridae›
Tremovirus›
tremovirus_B1
TaxID: 2058161
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 127-256
Domain cluster:
rep: 2A__YP_009055014__Chicken_picornavirus_2__1534545__D258-371
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04970.20 best | LRAT | 40.5 | 4.20e-10 | 73.1% | 84.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lktA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.73 | 53.0 | 5.44e-01 | 74.6% | 91.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3917565 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.81 | 66.0 | 6.29e-01 | 85.4% | 91.3% |
| 3893356 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.81 | 63.0 | 5.73e-01 | 80.8% | 80.0% |
| 3527284 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.81 | 60.0 | 5.74e-01 | 76.2% | 77.9% |
| 3888854 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.80 | 66.0 | 6.50e-01 | 86.2% | 94.1% |
| 3263136 | 219.1.1.37 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C97 | 0.65 | 56.0 | 5.53e-01 | 93.8% | 98.6% |
| 3607264 | 219.1.1.37 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C97 | 0.64 | 56.0 | 5.46e-01 | 95.4% | 99.3% |
| 3705615 | 219.1.1.37 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C97 | 0.64 | 54.0 | 5.14e-01 | 92.3% | 98.7% |
| 3783571 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.54 | 42.0 | 3.54e-01 | 80.8% | 51.2% |