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putative_A3L_protein
Euk-VirOrthopoxvirus_Abatino
putative_A3L_protein__YP_010085790__Orthopoxvirus_Abatino__2478919
Identity
- Accession:
- YP_010085790 ↗
- Protein ID:
- putative_A3L_protein
- Kingdom:
- euk
Quality
71.4
mean pLDDT
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 88-166
Domain cluster:
rep: major_core_protein_4b__YP_009329728__BeAn_58058_virus__67082__D103-163
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03292.20 best | Pox_P4B | 130.6 | 8.70e-38 | 100.0% | 12.0% |
D2
medium
residues 179-268
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03292.20 best | Pox_P4B | 164.0 | 7.10e-48 | 100.0% | 13.7% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 36.0 | 3.87e-01 | 94.4% | 79.5% |
| 1a0aA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.53 | 28.0 | 3.12e-01 | 88.9% | 65.1% |
D3
medium
residues 269-380
Domain cluster:
rep: Virion_core_protein_P4b__YP_227478__Deerpox_virus_W-848-83__305674__D221-246_290-366
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03292.20 best | Pox_P4B | 218.8 | 1.80e-64 | 100.0% | 17.1% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5my3A00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.59 | 39.0 | 3.22e-01 | 74.1% | 36.9% |
| 3wd6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 39.0 | 3.84e-01 | 75.0% | 97.5% |
| 2zb9A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 37.0 | 3.56e-01 | 74.1% | 88.4% |
| 3ufbA01 | 1.20.1260.30 | Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.52 | 40.0 | 3.59e-01 | 81.2% | 94.3% |
| 5ab0C04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.52 | 36.0 | 2.63e-01 | 72.3% | 30.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4667276 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.63 | 51.0 | 3.47e-01 | 89.3% | 59.3% |
| 3411599 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.62 | 50.0 | 3.30e-01 | 89.3% | 55.6% |
| 3691639 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.60 | 49.0 | 3.21e-01 | 88.4% | 56.1% |
| 3674287 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.59 | 47.0 | 3.19e-01 | 89.3% | 56.8% |
| 1569529 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.58 | 40.0 | 3.30e-01 | 77.7% | 39.4% |
| 54285 | 633.9.1.0 ↗ | alpha bundles › Bromodomain-like › PA2201 N-terminal domain-like › PA2201 N-terminal domain-like | 0.56 | 39.0 | 3.79e-01 | 70.5% | 73.4% |
| 3798334 | 609.1.1.0 ↗ | alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase | 0.56 | 39.0 | 3.88e-01 | 71.4% | 72.2% |
| 3936223 | 4193.1.1.1 ↗ | alpha arrays › RUN domain › RUN domain › RUN domain › RUN | 0.53 | 38.0 | 3.31e-01 | 74.1% | 71.1% |
| 3250048 | 101.1.2.401 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_GTF3C1_N | 0.50 | 26.0 | 3.24e-01 | 70.5% | 83.1% |
| 5009335 | 3281.1.2.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related › NADHdh | 0.50 | 41.0 | 2.99e-01 | 91.1% | 86.7% |
| 3740479 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.50 | 37.0 | 3.24e-01 | 83.9% | 51.2% |
D4
medium
residues 381-436_452-474_486-548_610-647
Domain cluster:
rep: hypothetical_protein_MPVG_00080__YP_007676148__Micromonas_pusilla_virus_12T__755272__D90-240
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03292.20 best | Pox_P4B | 224.4 | 3.70e-66 | 80.0% | 26.6% |
| PF03292.20 | Pox_P4B | 65.3 | 5.20e-18 | 21.7% | 5.9% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4msxA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.72 | 58.0 | 4.79e-01 | 94.4% | 49.7% |
| 3i3tA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.69 | 58.0 | 4.73e-01 | 92.2% | 51.5% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 43.0 | 4.89e-01 | 92.2% | 82.5% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.67 | 57.0 | 4.74e-01 | 91.7% | 53.3% |
| 3ihpA03 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.64 | 57.0 | 4.55e-01 | 93.9% | 58.5% |
| 3wxeA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 57.0 | 4.69e-01 | 100.0% | 58.8% |
| 2vhfB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 53.0 | 4.16e-01 | 93.9% | 65.0% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 38.0 | 4.11e-01 | 92.8% | 88.8% |
| 3pjyA00 | 2.60.120.1140 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 | 0.50 | 31.0 | 3.61e-01 | 91.7% | 85.3% |
| 3fw6A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 32.0 | 3.89e-01 | 82.2% | 99.1% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3246201 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.76 | 59.0 | 4.78e-01 | 92.2% | 46.4% |
| 3219196 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.75 | 57.0 | 4.76e-01 | 94.4% | 49.1% |
| 3178434 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.75 | 58.0 | 4.57e-01 | 100.0% | 41.4% |
| 3739929 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.69 | 62.0 | 5.00e-01 | 99.4% | 53.3% |
| 3586488 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.69 | 62.0 | 4.81e-01 | 94.4% | 58.1% |
| 3166921 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.68 | 61.0 | 4.88e-01 | 94.4% | 51.2% |
| 3920985 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.68 | 60.0 | 4.62e-01 | 91.1% | 54.2% |
| 3652683 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.68 | 62.0 | 4.68e-01 | 94.4% | 56.1% |
| 4265797 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.68 | 63.0 | 4.83e-01 | 96.1% | 54.9% |
| 3529004 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.68 | 61.0 | 4.84e-01 | 94.4% | 51.2% |
| 3237004 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.67 | 60.0 | 4.56e-01 | 92.2% | 54.9% |
| 3498631 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.67 | 59.0 | 4.47e-01 | 92.2% | 47.7% |
| 3911651 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.67 | 61.0 | 4.76e-01 | 99.4% | 48.9% |
| 3783065 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.66 | 58.0 | 4.47e-01 | 91.7% | 46.0% |
| 3599791 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.65 | 62.0 | 4.72e-01 | 99.4% | 49.5% |
| 3418449 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.65 | 59.0 | 4.28e-01 | 95.6% | 38.6% |
| 3618846 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.65 | 59.0 | 4.63e-01 | 95.6% | 48.9% |
| None | — | 0.65 | 57.0 | 4.38e-01 | 91.7% | 51.2% | |
| 3226036 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.64 | 58.0 | 4.50e-01 | 94.4% | 49.6% |
| 4029285 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.64 | 58.0 | 4.34e-01 | 94.4% | 46.7% |
| 3230589 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.61 | 43.0 | 4.03e-01 | 89.4% | 58.2% |
| 4583705 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 53.0 | 4.43e-01 | 92.2% | 58.3% |
| 5064765 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.53 | 31.0 | 3.59e-01 | 90.6% | 80.0% |
D5
medium
residues 549-609
Domain cluster:
rep: 94L__NP_938349__Yaba_monkey_tumor_virus__38804__D558-618
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03292.20 best | Pox_P4B | 85.7 | 3.40e-24 | 100.0% | 9.4% |