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putative_A47L_protein
Euk-VirOrthopoxvirus_Abatino
putative_A47L_protein__YP_010085838__Orthopoxvirus_Abatino__2478919
Identity
- Accession:
- YP_010085838 ↗
- Protein ID:
- putative_A47L_protein
- Kingdom:
- euk
Quality
77.4
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 168-243
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06334.16 best | Orthopox_A47 | 170.4 | 6.10e-50 | 100.0% | 31.1% |
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ccqA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 63.0 | 5.86e-01 | 96.1% | 86.9% |
| 2fphX01 | 3.30.1370.160 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.71 | 49.0 | 4.96e-01 | 72.4% | 85.7% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 46.0 | 5.02e-01 | 98.7% | 85.0% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 53.0 | 5.11e-01 | 84.2% | 93.0% |
| 4kibA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 55.0 | 5.11e-01 | 96.1% | 82.8% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.64 | 45.0 | 4.67e-01 | 75.0% | 98.6% |
| 1pkfA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.63 | 45.0 | 2.85e-01 | 75.0% | 73.4% |
| 1oltA02 | 1.10.10.920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 51.0 | 5.05e-01 | 90.8% | 100.0% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 4.40e-01 | 82.9% | 78.6% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.62 | 39.0 | 3.88e-01 | 100.0% | 60.0% |
| 4yiiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 44.0 | 4.49e-01 | 73.7% | 100.0% |
| 7eehA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.62 | 46.0 | 3.25e-01 | 80.3% | 96.4% |
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.61 | 53.0 | 4.27e-01 | 100.0% | 92.3% |
| 7chdE01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 45.0 | 3.56e-01 | 82.9% | 41.0% |
| 2p8tA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 4.77e-01 | 90.8% | 100.0% |
| 4byfC01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.58 | 49.0 | 4.68e-01 | 94.7% | 88.8% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 50.0 | 4.21e-01 | 97.4% | 66.7% |
| 4bpxD00 | 1.20.930.80 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.58 | 42.0 | 3.11e-01 | 77.6% | 33.8% |
| 1b4bA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 46.0 | 4.73e-01 | 90.8% | 100.0% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 49.0 | 4.26e-01 | 98.7% | 67.7% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.57 | 51.0 | 4.44e-01 | 100.0% | 100.0% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 3.95e-01 | 93.4% | 56.0% |
| 1ydlA00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.56 | 39.0 | 4.02e-01 | 73.7% | 81.7% |
| 3getA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 42.0 | 3.96e-01 | 81.6% | 77.7% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 4.04e-01 | 98.7% | 69.9% |
| 4b0zA00 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 45.0 | 3.26e-01 | 90.8% | 32.6% |
| 2wb6A00 | 3.90.1150.90 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.55 | 47.0 | 4.13e-01 | 96.1% | 85.1% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 45.0 | 4.25e-01 | 92.1% | 74.7% |
| 3dgpB00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.54 | 38.0 | 4.01e-01 | 73.7% | 93.7% |
| 2vf7A03 | 1.10.8.280 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › ABC transporter ATPase domain-like | 0.54 | 43.0 | 3.68e-01 | 88.2% | 82.4% |
| 1kutB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 33.0 | 3.18e-01 | 81.6% | 53.9% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 3.92e-01 | 100.0% | 62.7% |
| 1rz4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 3.85e-01 | 82.9% | 70.7% |
| 5ttjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 44.0 | 3.20e-01 | 92.1% | 97.7% |
| 4r5zA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 41.0 | 3.58e-01 | 86.8% | 54.0% |
| 1bm8A00 | 3.10.260.10 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain | 0.53 | 39.0 | 3.67e-01 | 80.3% | 71.7% |
| 3i5gC02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 37.0 | 3.80e-01 | 73.7% | 93.1% |
| 1ibaA00 | 3.30.1360.60 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Glucose permease domain IIB | 0.53 | 44.0 | 4.44e-01 | 98.7% | 98.7% |
| 3gfhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.53 | 43.0 | 3.87e-01 | 93.4% | 89.1% |
| 7qjnA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 43.0 | 2.98e-01 | 92.1% | 87.9% |
| 5suhA02 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.52 | 44.0 | 4.08e-01 | 100.0% | 97.1% |
| 1z4hA01 | 1.10.238.160 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.52 | 36.0 | 3.94e-01 | 73.7% | 100.0% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 36.0 | 3.58e-01 | 73.7% | 92.4% |
| 1jmuB01 | 3.90.1370.10 | Alpha Beta › Alpha-Beta Complex › Protein mu-1, chain B, domain 1 › Protein mu-1, chain B, domain 1 | 0.52 | 36.0 | 3.16e-01 | 73.7% | 75.0% |
| 2fa5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 45.0 | 3.74e-01 | 100.0% | 66.9% |
| 1rp0A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 42.0 | 3.04e-01 | 93.4% | 93.2% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 39.0 | 4.02e-01 | 94.7% | 85.1% |
| 3qhyA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 43.0 | 3.03e-01 | 97.4% | 48.1% |
| 3di5A00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.50 | 45.0 | 3.60e-01 | 100.0% | 65.8% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4029355 | 320.4.1.3 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB | 0.75 | 66.0 | 5.97e-01 | 100.0% | 86.7% |
| 3811947 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.75 | 61.0 | 5.46e-01 | 88.2% | 68.6% |
| 4991516 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 65.0 | 5.84e-01 | 100.0% | 77.1% |
| 3704813 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.69 | 51.0 | 2.98e-01 | 80.3% | 95.2% |
| 4024141 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 60.0 | 4.44e-01 | 98.7% | 49.5% |
| 4023995 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.67 | 50.0 | 2.93e-01 | 80.3% | 97.8% |
| 3699603 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 49.0 | 2.85e-01 | 80.3% | 87.9% |
| 4141722 | 605.1.1.289 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PF26892 | 0.66 | 58.0 | 5.23e-01 | 97.4% | 72.0% |
| 3415116 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 47.0 | 2.71e-01 | 77.6% | 90.1% |
| 4264298 | 101.1.2.761 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26381 | 0.64 | 53.0 | 4.47e-01 | 93.4% | 92.6% |
| 3702168 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.64 | 46.0 | 2.68e-01 | 78.9% | 92.8% |
| 5070233 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 55.0 | 5.26e-01 | 100.0% | 88.9% |
| 3984604 | 7558.1.1.10 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › GPAT_C | 0.63 | 52.0 | 4.89e-01 | 92.1% | 91.6% |
| 4062280 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.62 | 43.0 | 4.03e-01 | 73.7% | 78.0% |
| 3649742 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.62 | 42.0 | 2.52e-01 | 72.4% | 98.9% |
| 5059522 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.62 | 49.0 | 4.76e-01 | 92.1% | 78.8% |
| 4938492 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 53.0 | 5.23e-01 | 97.4% | 96.2% |
| 3846669 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.61 | 46.0 | 2.67e-01 | 81.6% | 82.7% |
| 4121234 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 53.0 | 5.17e-01 | 97.4% | 88.2% |
| 5042999 | 2003.1.3.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD-depend_C | 0.61 | 49.0 | 3.04e-01 | 90.8% | 31.5% |
| 3396991 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 45.0 | 4.23e-01 | 84.2% | 79.0% |
| 5023773 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.60 | 44.0 | 3.44e-01 | 80.3% | 43.4% |
| 4990500 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 51.0 | 4.87e-01 | 100.0% | 94.4% |
| 3256533 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.59 | 52.0 | 2.99e-01 | 100.0% | 13.7% |
| 4567314 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.59 | 51.0 | 2.99e-01 | 100.0% | 14.1% |
| 3275675 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 51.0 | 3.06e-01 | 100.0% | 15.5% |
| 3533560 | 101.19.1.1 ↗ | alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C | 0.59 | 47.0 | 4.61e-01 | 92.1% | 97.6% |
| 3939429 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.59 | 51.0 | 3.02e-01 | 100.0% | 13.4% |
| 3627622 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.58 | 51.0 | 2.93e-01 | 100.0% | 12.0% |
| 334009 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.58 | 50.0 | 4.23e-01 | 100.0% | 61.6% |
| None | — | 0.58 | 52.0 | 3.01e-01 | 100.0% | 32.2% | |
| 3231718 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.58 | 51.0 | 3.01e-01 | 100.0% | 13.5% |
| 3939722 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.58 | 50.0 | 2.76e-01 | 100.0% | 6.9% |
| 3931554 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 48.0 | 3.95e-01 | 96.1% | 56.7% |
| 2590 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.57 | 49.0 | 4.06e-01 | 97.4% | 53.2% |
| 4979253 | 241.9.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF1801 | 0.57 | 40.0 | 3.59e-01 | 75.0% | 74.5% |
| 4316044 | 101.1.2.388 ↗ | alpha arrays › HTH › HTH › winged helix domain › YjhX_toxin | 0.56 | 48.0 | 4.59e-01 | 98.7% | 95.6% |
| 3178507 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.56 | 46.0 | 3.20e-01 | 100.0% | 72.3% |
| 5013689 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.56 | 40.0 | 2.71e-01 | 77.6% | 41.8% |
| 5063559 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 4.70e-01 | 97.4% | 100.0% |
| 3282607 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 4.07e-01 | 97.4% | 67.2% |
| 2320836 | 4340.1.1.1 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb5 | 0.55 | 38.0 | 4.03e-01 | 73.7% | 89.4% |
| 3751221 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 47.0 | 2.70e-01 | 100.0% | 15.6% |
| 4278275 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.55 | 50.0 | 4.34e-01 | 100.0% | 92.2% |
| 5009842 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.55 | 44.0 | 3.29e-01 | 89.5% | 74.5% |
| 4946919 | 4271.1.1.0 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like | 0.55 | 44.0 | 3.27e-01 | 90.8% | 38.1% |
| 4341158 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.54 | 44.0 | 3.61e-01 | 96.1% | 76.1% |
| 4999511 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 45.0 | 4.01e-01 | 100.0% | 87.5% |
| 5039734 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 40.0 | 4.22e-01 | 85.5% | 96.9% |
| 5078462 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.54 | 38.0 | 2.69e-01 | 76.3% | 22.7% |
| 3599513 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 43.0 | 3.67e-01 | 92.1% | 66.2% |
| 4567313 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.52 | 44.0 | 2.60e-01 | 97.4% | 78.4% |
| 3180751 | 101.1.9.90 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › NOL10_2nd | 0.52 | 35.0 | 3.93e-01 | 71.1% | 94.5% |
| 3387423 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.52 | 40.0 | 3.19e-01 | 85.5% | 80.0% |
| None | — | 0.52 | 39.0 | 2.15e-01 | 82.9% | 31.7% | |
| 4527101 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.52 | 43.0 | 3.49e-01 | 96.1% | 53.8% |
| 3518708 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.52 | 43.0 | 2.57e-01 | 97.4% | 81.2% |
| 3258549 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.51 | 43.0 | 2.94e-01 | 100.0% | 72.0% |
| 4863385 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.51 | 42.0 | 3.28e-01 | 94.7% | 56.4% |
| 5025736 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 43.0 | 3.94e-01 | 98.7% | 100.0% |
| 3780716 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.50 | 42.0 | 2.95e-01 | 100.0% | 71.0% |
| 3411124 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.50 | 41.0 | 2.44e-01 | 96.1% | 96.4% |
| 4951175 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.50 | 42.0 | 3.21e-01 | 100.0% | 95.7% |
D2
medium
residues 79-167
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06334.16 best | Orthopox_A47 | 184.6 | 2.80e-54 | 100.0% | 36.5% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hayA02 | 1.25.40.440 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain | 0.62 | 39.0 | 4.09e-01 | 84.3% | 69.6% |
| 1wizA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 35.0 | 3.73e-01 | 79.8% | 63.3% |
| 4dccA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 40.0 | 4.28e-01 | 73.0% | 81.1% |
| 3tadC03 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.60 | 37.0 | 3.63e-01 | 78.7% | 55.4% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 33.0 | 3.26e-01 | 73.0% | 48.5% |
| 2ozbB01 | 1.10.287.4070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 38.0 | 3.35e-01 | 98.9% | 45.0% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 37.0 | 4.25e-01 | 88.8% | 98.3% |
| 2dt7B01 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.57 | 37.0 | 4.29e-01 | 96.6% | 100.0% |
| 3u9jA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.56 | 42.0 | 3.55e-01 | 82.0% | 84.1% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.55 | 41.0 | 4.05e-01 | 80.9% | 79.8% |
| 4o7iA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.55 | 48.0 | 3.85e-01 | 100.0% | 91.2% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.55 | 36.0 | 3.53e-01 | 86.5% | 61.2% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 36.0 | 3.37e-01 | 73.0% | 53.6% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.54 | 44.0 | 3.38e-01 | 87.6% | 44.3% |
| 1dgfA03 | 1.20.1370.60 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › | 0.54 | 33.0 | 3.15e-01 | 86.5% | 47.4% |
| 1y2mD01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.54 | 36.0 | 2.78e-01 | 70.8% | 41.4% |
| 4dveA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.53 | 46.0 | 3.70e-01 | 100.0% | 72.0% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 33.0 | 3.50e-01 | 88.8% | 70.5% |
| 8sbeA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.53 | 37.0 | 2.98e-01 | 73.0% | 96.8% |
| 2xzeB00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 36.0 | 3.16e-01 | 92.1% | 44.9% |
| 5haxA01 | 1.20.58.1780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 47.0 | 3.45e-01 | 98.9% | 88.5% |
| 2kbbA00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.52 | 43.0 | 3.55e-01 | 94.4% | 87.9% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 31.0 | 2.87e-01 | 74.2% | 45.4% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 34.0 | 3.45e-01 | 80.9% | 67.4% |
| 1eo0A00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.50 | 27.0 | 2.92e-01 | 73.0% | 58.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3603171 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.65 | 45.0 | 3.69e-01 | 73.0% | 80.6% |
| 5039798 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.62 | 35.0 | 3.42e-01 | 89.9% | 50.0% |
| 3709964 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 52.0 | 4.92e-01 | 97.8% | 96.4% |
| 3413973 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 50.0 | 4.68e-01 | 98.9% | 95.7% |
| 3763961 | 109.4.1.1385 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IF140_C, TPR_IF140-IFT172 | 0.58 | 38.0 | 3.43e-01 | 83.1% | 48.3% |
| 5042484 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.58 | 42.0 | 3.66e-01 | 78.7% | 53.8% |
| 4575178 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.55 | 38.0 | 3.02e-01 | 71.9% | 68.1% |
| 3640245 | 109.58.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA repair protein Rev1 C-terminal domain › DNA repair protein Rev1 C-terminal domain › REV1_C | 0.54 | 44.0 | 3.93e-01 | 89.9% | 69.2% |
| 3287854 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.54 | 41.0 | 3.31e-01 | 88.8% | 40.6% |
| 2486014 | 604.39.1.2 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › BioY | 0.53 | 46.0 | 3.70e-01 | 100.0% | 72.0% |
| 4504903 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.53 | 42.0 | 4.11e-01 | 95.5% | 78.9% |
| 406536 | 206.1.1.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › HipA_C | 0.53 | 42.0 | 2.95e-01 | 86.5% | 30.7% |
| 3741026 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 37.0 | 2.78e-01 | 85.4% | 27.8% |
| 5071125 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.52 | 38.0 | 3.61e-01 | 80.9% | 63.8% |
| 5046177 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.52 | 41.0 | 4.10e-01 | 95.5% | 82.2% |
| 4928083 | 206.1.1.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 | 0.52 | 41.0 | 3.02e-01 | 89.9% | 52.1% |
| 4975933 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.52 | 43.0 | 4.14e-01 | 92.1% | 84.8% |
| 4038171 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.52 | 32.0 | 3.26e-01 | 78.7% | 60.0% |
| 3777619 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.52 | 35.0 | 3.05e-01 | 73.0% | 45.9% |
| 3916041 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.51 | 39.0 | 3.44e-01 | 83.1% | 83.0% |
| 2557383 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.51 | 35.0 | 3.18e-01 | 70.8% | 78.0% |