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putative_AAA_family_ATPase

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

putative_AAA_family_ATPase__YP_003986983__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003986983 ↗
Protein ID:
putative_AAA_family_ATPase
Kingdom:
euk

Quality

62.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 48-124
PDB
D2 high residues 134-215
PDB
Domain cluster: rep: IMGVR_UViG_3300001073_000001-3300001073-C687J13245_10000113__D94-163
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qcsA02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.89 82.0 7.49e-01 98.8% 90.5%
1cr5B02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.84 70.0 6.63e-01 87.8% 86.3%
2jv2A00 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.84 67.0 6.91e-01 91.5% 90.8%
2pjhB02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.76 66.0 6.01e-01 93.9% 72.6%
1zc1A02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.75 62.0 6.37e-01 89.0% 96.1%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.64 48.0 4.09e-01 81.7% 98.6%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.60 45.0 3.98e-01 81.7% 92.1%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 32.0 3.24e-01 97.6% 53.7%
1kvdB00 3.30.44.10 Alpha Beta › 2-Layer Sandwich › Smk Toxin, Beta chain › Smk Toxin, beta chain 0.56 39.0 4.02e-01 73.2% 77.9%
5wfiA01 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.54 38.0 3.39e-01 80.5% 51.2%
2w2sA00 3.10.460.20 Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 0.53 39.0 3.21e-01 80.5% 80.4%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.51 38.0 3.41e-01 81.7% 98.3%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.50 35.0 3.36e-01 72.0% 76.8%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 35.0 3.39e-01 74.4% 84.8%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3180800 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.90 81.0 7.26e-01 96.3% 94.5%
3884492 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.90 84.0 7.38e-01 100.0% 89.6%
3492327 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.89 84.0 7.63e-01 100.0% 91.4%
3784922 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.89 83.0 7.44e-01 100.0% 94.5%
4027678 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.89 83.0 7.41e-01 100.0% 84.5%
3685006 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.88 82.0 7.07e-01 98.8% 90.8%
3743745 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.88 83.0 7.38e-01 100.0% 93.6%
3652467 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.88 83.0 7.39e-01 100.0% 85.5%
3245334 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.88 82.0 7.01e-01 100.0% 93.6%
4998502 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.88 72.0 7.52e-01 91.5% 93.3%
3167285 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.88 80.0 7.18e-01 97.6% 90.9%
4978260 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.88 72.0 7.36e-01 92.7% 88.7%
5078755 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.88 72.0 7.55e-01 92.7% 94.7%
4967959 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.87 70.0 7.33e-01 91.5% 92.0%
4982744 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.87 71.0 7.40e-01 92.7% 93.3%
3257012 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.87 79.0 7.50e-01 97.6% 94.7%
4928939 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.86 71.0 7.04e-01 93.9% 83.5%
4927348 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.86 72.0 7.51e-01 92.7% 96.0%
4994054 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.86 74.0 7.49e-01 92.7% 92.5%
4967109 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.86 72.0 7.55e-01 93.9% 96.0%
4340211 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.86 71.0 7.19e-01 92.7% 88.7%
4931095 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.86 71.0 7.39e-01 93.9% 94.7%
4929938 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.86 70.0 6.99e-01 93.9% 83.5%
4991007 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.85 69.0 7.29e-01 89.0% 94.6%
4995599 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.85 73.0 7.41e-01 91.5% 92.5%
3594625 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.85 78.0 7.17e-01 100.0% 91.4%
3715863 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.85 79.0 7.45e-01 100.0% 93.7%
3598454 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.85 75.0 6.81e-01 93.9% 96.2%
5045055 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.85 70.0 6.91e-01 92.7% 83.5%
4976725 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.85 69.0 7.27e-01 92.7% 94.7%
4940825 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.85 70.0 6.90e-01 92.7% 83.5%
5045457 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.85 70.0 6.99e-01 92.7% 84.7%
5078747 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.84 74.0 7.50e-01 93.9% 95.0%
5042185 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.84 71.0 7.23e-01 93.9% 91.3%
4943792 229.1.1.12 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › AAA 0.84 71.0 7.05e-01 93.9% 85.9%
5053342 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.84 68.0 7.16e-01 91.5% 93.3%
4979697 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.84 74.0 7.20e-01 93.9% 85.6%
3862274 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.84 71.0 6.88e-01 89.0% 82.2%
4991440 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.84 63.0 6.79e-01 93.9% 92.9%
165655 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.84 67.0 6.91e-01 91.5% 90.8%
5075127 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.84 70.0 7.15e-01 93.9% 91.3%
4372907 229.1.1.9 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PRS2_N 0.83 70.0 6.91e-01 89.0% 94.1%
5057265 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.83 70.0 7.09e-01 92.7% 91.3%
5050555 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.83 66.0 6.95e-01 91.5% 92.0%
5001339 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.83 69.0 7.07e-01 92.7% 91.3%
4976326 229.1.1.9 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PRS2_N 0.83 73.0 6.89e-01 93.9% 91.6%
5060584 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.82 73.0 7.23e-01 93.9% 92.9%
3406946 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.82 72.0 6.72e-01 93.9% 92.0%
5006793 229.1.1.9 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PRS2_N 0.82 70.0 6.99e-01 91.5% 94.1%
4938646 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.82 71.0 7.23e-01 92.7% 95.0%
3481990 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.82 70.0 7.10e-01 91.5% 92.5%
4928877 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.82 69.0 6.85e-01 92.7% 85.9%
4991500 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.82 69.0 6.87e-01 93.9% 87.1%
5071198 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.81 66.0 6.94e-01 92.7% 94.7%
5017605 229.1.1.9 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PRS2_N 0.81 71.0 6.75e-01 93.9% 88.4%
4972002 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.81 71.0 6.44e-01 92.7% 94.3%
4413380 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.81 72.0 6.86e-01 96.3% 85.3%
3832949 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.80 71.0 6.85e-01 93.9% 94.4%
3615553 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.80 70.0 6.09e-01 93.9% 84.2%
4980993 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.80 71.0 7.03e-01 95.1% 91.8%
3669540 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.80 68.0 6.95e-01 93.9% 93.8%
4021343 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.80 68.0 6.88e-01 90.2% 93.8%
3486352 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.80 70.0 6.75e-01 93.9% 86.7%
3679539 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.80 69.0 6.98e-01 92.7% 93.8%
5026962 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.80 67.0 6.85e-01 92.7% 92.5%
4024751 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.79 69.0 6.57e-01 93.9% 88.4%
4947976 229.1.1.12 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › AAA 0.79 69.0 6.56e-01 93.9% 89.5%
3596666 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.79 69.0 6.67e-01 93.9% 85.6%
3427277 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.79 68.0 6.75e-01 95.1% 89.4%
4029158 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.79 66.0 6.70e-01 89.0% 95.0%
4930241 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.79 68.0 6.60e-01 92.7% 93.3%
3605375 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.79 68.0 6.65e-01 93.9% 94.4%
5005633 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.79 68.0 6.43e-01 92.7% 90.5%
3412949 101.1.2.651 ↗ alpha arrays › HTH › HTH › winged helix domain › PF29595 0.78 66.0 6.68e-01 93.9% 91.3%
3636770 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.78 65.0 6.01e-01 91.5% 83.8%
5045003 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.78 63.0 6.31e-01 87.8% 91.8%
3516179 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.77 67.0 6.65e-01 95.1% 91.7%
3993833 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.77 64.0 6.31e-01 87.8% 94.1%
5077331 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.77 65.0 6.34e-01 91.5% 96.7%
4059870 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.76 66.0 6.21e-01 93.9% 82.0%
3255740 229.1.1.3 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX-1N 0.76 65.0 6.61e-01 93.9% 95.0%
4501298 229.1.1.6 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX6_4th 0.75 65.0 6.16e-01 92.7% 89.5%
3177458 229.1.1.3 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX-1N 0.75 65.0 6.63e-01 93.9% 96.2%
3211711 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.75 68.0 6.31e-01 97.6% 89.0%
3263241 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.74 65.0 6.22e-01 95.1% 87.4%
3625789 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.73 63.0 5.90e-01 93.9% 90.0%
3933009 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.70 64.0 6.24e-01 100.0% 98.9%
3489759 229.1.1.10 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PF29595 0.69 64.0 5.93e-01 100.0% 89.0%
3887625 382.1.1.4 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › ecTbetaR2 0.52 38.0 3.53e-01 90.2% 60.0%
D3 high residues 219-322
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jv2A00 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.72 49.0 5.55e-01 93.3% 94.7%
1zc1A02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.70 50.0 5.63e-01 90.4% 100.0%
1qcsA02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.67 59.0 5.91e-01 99.0% 94.3%
1cr5B02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.66 51.0 5.39e-01 90.4% 90.5%
4xl1E01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 39.0 3.42e-01 75.0% 100.0%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027678 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.75 66.0 6.46e-01 100.0% 88.2%
4991007 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.75 52.0 5.94e-01 91.3% 100.0%
3652467 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.73 64.0 6.32e-01 100.0% 89.1%
5045003 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.73 55.0 6.01e-01 90.4% 96.5%
4994054 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.73 53.0 5.86e-01 94.2% 97.5%
5045055 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.73 51.0 5.55e-01 94.2% 88.2%
4998502 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.73 50.0 5.73e-01 93.3% 98.7%
4021343 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.71 52.0 5.82e-01 93.3% 100.0%
4927348 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.71 49.0 5.60e-01 92.3% 100.0%
3784922 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.71 65.0 6.43e-01 100.0% 98.2%
3257012 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.70 59.0 6.20e-01 98.1% 98.9%
3427277 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.70 52.0 5.62e-01 96.2% 95.3%
4029158 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.70 51.0 5.73e-01 91.3% 100.0%
5053342 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.69 48.0 5.45e-01 93.3% 98.7%
3685006 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.69 63.0 5.98e-01 99.0% 94.2%
3492327 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.69 61.0 6.13e-01 100.0% 95.2%
3743745 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.69 63.0 6.21e-01 100.0% 97.3%
3167285 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.69 62.0 6.10e-01 98.1% 94.5%
3180800 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.69 61.0 6.04e-01 97.1% 98.2%
3211711 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.68 56.0 5.76e-01 97.1% 92.0%
4501298 229.1.1.6 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX6_4th 0.67 55.0 5.72e-01 95.2% 94.7%
3598454 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.66 58.0 5.86e-01 95.2% 100.0%
3884492 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.66 60.0 5.84e-01 100.0% 93.0%
3605375 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.66 53.0 5.62e-01 96.2% 100.0%
3615553 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.65 57.0 5.48e-01 95.2% 88.3%
3636770 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.65 54.0 5.39e-01 93.3% 88.6%
5017605 229.1.1.9 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PRS2_N 0.65 51.0 5.27e-01 95.2% 92.6%
3790640 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.57 44.0 3.56e-01 81.7% 97.6%
3391060 382.1.1.6 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR 0.54 34.0 3.42e-01 92.3% 60.6%
5041620 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.53 37.0 2.95e-01 73.1% 69.8%
3585855 382.1.1.3 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Activin_recp 0.53 34.0 3.55e-01 91.3% 70.5%
D4 high residues 326-426
PDB
Domain cluster: rep: IMGVR_UViG_3300001073_000001-3300001073-C687J13245_10000113__D94-163
D5 high residues 751-841
PDB
Domain cluster: rep: IMGVR_UViG_3300010350_000704-3300010350-Ga0116244_1000871117__D15-101
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17862.8 best AAA_lid_3 35.6 7.20e-09 63.7% 84.4%
D6 medium residues 427-501
PDB
D7 medium residues 562-749
PDB