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putative_ADP-ribosyl_glycohydrolase

Euk-Vir

Cafeteria_roenbergensis_virus_BV-PW1

putative_ADP-ribosyl_glycohydrolase__YP_003969803__Cafeteria_roenbergensis_virus_BV-PW1__693272

Identity

Accession:: YP_003969803 ↗
Protein ID:: putative_ADP-ribosyl_glycohydrolase
Kingdom:: euk

Quality

77.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Rheavirus› Cafeteria_roenbergensis_virus_BV-PW1

TaxID: 693272

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 56-147

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2wocA00	1.10.4080.10	Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1	0.84	78.0	5.34e-01	100.0%	33.0%
4fcyA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.57	33.0	3.50e-01	80.4%	64.1%
1qdmA03	1.10.225.10	Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like	0.55	33.0	3.53e-01	88.0%	68.8%
7s03A01	1.10.10.1450	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.54	30.0	3.65e-01	82.6%	94.0%
1x4pA00	1.10.10.790	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module	0.53	35.0	4.02e-01	92.4%	93.9%
1ia6A00	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.53	43.0	2.88e-01	92.4%	60.0%
1sxjE03	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.53	47.0	4.62e-01	98.9%	94.8%
6hwjA01	3.90.1200.10	Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe	0.52	45.0	3.40e-01	100.0%	83.7%
1or4B00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.51	40.0	3.43e-01	100.0%	50.6%
3ckyA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.50	44.0	3.95e-01	100.0%	89.6%
1dlwA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.50	36.0	3.43e-01	100.0%	61.2%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
144845	528.1.1.1 ↗	alpha bundles › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP_ribosyl_GH	0.85	80.0	5.42e-01	100.0%	32.5%
4948956	528.1.1.1 ↗	alpha bundles › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP_ribosyl_GH	0.77	71.0	5.00e-01	100.0%	36.4%
4927302	1075.1.2.0 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain	0.56	50.0	4.35e-01	100.0%	72.1%
4928682	5060.2.1.0 ↗	alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain	0.55	47.0	4.27e-01	95.7%	72.0%
3391	138.1.1.11 ↗	alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › RFC_C	0.53	47.0	4.63e-01	100.0%	93.9%
5044956	632.22.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats	0.52	34.0	3.03e-01	93.5%	46.2%
3214642	2484.1.1.50 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT	0.51	43.0	2.80e-01	93.5%	42.1%
3736326	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.51	28.0	3.21e-01	80.4%	73.8%

D2 medium residues 148-344

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03747.20 best	ADP_ribosyl_GH	35.0	1.80e-08	90.4%	47.0%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6g28A00	1.10.4080.10	Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1	0.86	79.0	6.27e-01	100.0%	52.1%
2yzvA00	1.10.4080.10	Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1	0.83	59.0	5.07e-01	100.0%	49.0%
2wocA00	1.10.4080.10	Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1	0.81	55.0	4.77e-01	100.0%	46.7%
2es9A00	1.20.1290.30	Mainly Alpha › Up-down Bundle › AhpD-like ›	0.57	29.0	3.86e-01	87.8%	92.0%
2f1kC02	1.10.3660.10	Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain	0.53	28.0	3.67e-01	76.6%	90.3%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3421834	3755.4.1.17 ↗	alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Rx_N	0.60	27.0	3.22e-01	70.1%	59.3%
4311002	4198.1.1.2 ↗	alpha arrays › TerB-like › TerB-like › TerB-like › ThylakoidFormat	0.57	44.0	4.40e-01	87.8%	78.0%
3461384	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.56	27.0	3.42e-01	85.8%	75.0%
3273387	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	48.0	4.25e-01	97.5%	73.8%