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putative_B20R_protein
Euk-VirOrthopoxvirus_Abatino
putative_B20R_protein__YP_010085865__Orthopoxvirus_Abatino__2478919
Identity
- Accession:
- YP_010085865 ↗
- Protein ID:
- putative_B20R_protein
- Kingdom:
- euk
Quality
67.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Orthopoxvirus_Abatino
TaxID: 2478919
Cluster
View cluster (58 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 706-794
Domain cluster:
rep: hypothetical_protein_VARVgp189__NP_042233__Variola_virus__10255__D709-775
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09372.16 best | PRANC | 53.2 | 4.20e-14 | 92.1% | 81.4% |
D2
medium
residues 1-68_283-296
D3
medium
residues 297-415
Domain cluster:
rep: ankyrin-containing_protein__YP_010085456__Akhmeta_virus__2200830__D135-235
D4
medium
residues 637-705
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.89 | 62.0 | 4.67e-01 | 73.9% | 33.1% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 62.0 | 6.73e-01 | 73.9% | 89.5% |
| 7f16R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.82 | 60.0 | 3.92e-01 | 76.8% | 19.5% |
| 7nc3F01 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.81 | 55.0 | 4.60e-01 | 73.9% | 43.0% |
| 1ykeD00 | 6.10.280.10 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator complex, subunit Med21 | 0.80 | 61.0 | 5.12e-01 | 81.2% | 56.6% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.79 | 60.0 | 5.86e-01 | 79.7% | 74.3% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 57.0 | 5.78e-01 | 84.1% | 79.1% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 56.0 | 5.77e-01 | 73.9% | 78.5% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.78 | 68.0 | 5.41e-01 | 94.2% | 57.7% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.78 | 58.0 | 4.79e-01 | 81.2% | 47.0% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.78 | 69.0 | 5.65e-01 | 94.2% | 88.8% |
| 3anwB00 | 1.20.58.2050 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 59.0 | 4.40e-01 | 87.0% | 35.2% |
| 1hqoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.76 | 55.0 | 4.42e-01 | 79.7% | 40.5% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 52.0 | 4.55e-01 | 73.9% | 48.5% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.76 | 58.0 | 5.59e-01 | 82.6% | 74.0% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.74 | 56.0 | 5.36e-01 | 79.7% | 78.2% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 56.0 | 4.97e-01 | 82.6% | 66.7% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 65.0 | 5.12e-01 | 100.0% | 74.1% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.73 | 52.0 | 3.75e-01 | 73.9% | 40.4% |
| 5dkoA02 | 1.10.3900.10 | Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like | 0.73 | 52.0 | 3.82e-01 | 100.0% | 30.5% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.72 | 49.0 | 4.48e-01 | 76.8% | 53.9% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.72 | 54.0 | 4.67e-01 | 82.6% | 53.6% |
| 7xxiA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.72 | 61.0 | 3.97e-01 | 92.8% | 24.8% |
| 4b7yD00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.70 | 48.0 | 4.32e-01 | 72.5% | 70.1% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.68 | 39.0 | 4.41e-01 | 71.0% | 77.6% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 46.0 | 3.89e-01 | 72.5% | 41.0% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.68 | 44.0 | 4.44e-01 | 72.5% | 65.7% |
| 3hwcA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.67 | 56.0 | 4.02e-01 | 95.7% | 77.6% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.65 | 45.0 | 3.63e-01 | 75.4% | 35.7% |
| 1kf6A03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.64 | 54.0 | 4.50e-01 | 92.8% | 56.7% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 43.0 | 3.74e-01 | 71.0% | 47.3% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 47.0 | 4.60e-01 | 84.1% | 74.4% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 44.0 | 4.31e-01 | 87.0% | 74.4% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.55 | 47.0 | 4.20e-01 | 94.2% | 67.7% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 47.0 | 3.70e-01 | 91.3% | 76.7% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5074150 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.94 | 68.0 | 7.65e-01 | 84.1% | 94.5% |
| 3992791 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.89 | 70.0 | 6.13e-01 | 81.2% | 60.0% |
| 3273923 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.87 | 68.0 | 4.10e-01 | 82.6% | 21.7% |
| 3181110 | 5086.1.1.110 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA | 0.87 | 67.0 | 5.93e-01 | 81.2% | 63.2% |
| 4961961 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.86 | 63.0 | 6.17e-01 | 76.8% | 72.0% |
| 3336964 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.86 | 67.0 | 4.43e-01 | 82.6% | 61.6% |
| 3576201 | 10.12.1.38 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PCO_ADO | 0.85 | 60.0 | 4.64e-01 | 72.5% | 37.0% |
| 3693258 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.85 | 66.0 | 5.60e-01 | 82.6% | 53.6% |
| 4396574 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.85 | 65.0 | 4.83e-01 | 81.2% | 35.4% |
| 3872946 | 601.19.1.55 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › PF28139 | 0.82 | 63.0 | 3.81e-01 | 81.2% | 14.5% |
| 4315986 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.82 | 57.0 | 5.21e-01 | 72.5% | 55.6% |
| 3577937 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.82 | 64.0 | 5.31e-01 | 82.6% | 55.7% |
| 3944240 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.81 | 58.0 | 5.22e-01 | 73.9% | 56.7% |
| 3298167 | 5086.1.1.62 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › XH | 0.81 | 63.0 | 4.93e-01 | 82.6% | 42.1% |
| 3468553 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.81 | 61.0 | 4.63e-01 | 79.7% | 39.9% |
| 3178532 | 109.4.1.1764 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 | 0.81 | 66.0 | 4.39e-01 | 87.0% | 30.2% |
| 4507542 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.81 | 59.0 | 5.37e-01 | 79.7% | 58.9% |
| 3231045 | 101.1.1.117 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CHDCT2 | 0.79 | 61.0 | 5.21e-01 | 82.6% | 53.3% |
| 3800295 | 109.4.1.1472 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2, Thoc2, THOC2_N | 0.79 | 73.0 | 3.96e-01 | 97.1% | 10.6% |
| 3629808 | 3291.1.1.130 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › CHDCT2 | 0.78 | 60.0 | 5.50e-01 | 82.6% | 67.8% |
| 3898292 | 192.7.1.47 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › CHDCT2 | 0.78 | 59.0 | 5.41e-01 | 82.6% | 62.2% |
| 3651880 | 192.8.1.401 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › BPS1 | 0.77 | 53.0 | 4.85e-01 | 72.5% | 55.6% |
| 4562953 | 2004.1.1.43 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRP54 | 0.76 | 70.0 | 4.53e-01 | 100.0% | 39.3% |
| 3509923 | 6103.1.1.0 ↗ | alpha bundles › Death domain-associated protein 6 histone binding domain › Death domain-associated protein 6 histone binding domain › Death domain-associated protein 6 histone binding domain | 0.76 | 57.0 | 4.13e-01 | 79.7% | 56.8% |
| 3794577 | 3331.1.1.14 ↗ | a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › CHDCT2 | 0.75 | 56.0 | 5.24e-01 | 82.6% | 64.7% |
| 4014485 | 5044.1.1.0 ↗ | extended segments › PsbZ-like › PsbZ-like › PsbZ-like | 0.73 | 63.0 | 5.66e-01 | 94.2% | 76.8% |
| 4028626 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.73 | 52.0 | 3.94e-01 | 84.1% | 31.2% |
| 3210948 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.73 | 54.0 | 5.13e-01 | 87.0% | 66.3% |
| 3731535 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.72 | 63.0 | 5.49e-01 | 94.2% | 73.0% |
| 3623842 | 601.24.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 0.72 | 50.0 | 4.11e-01 | 72.5% | 55.2% |
| 4029383 | 150.1.2.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase | 0.68 | 49.0 | 3.21e-01 | 76.8% | 27.7% |
| 3212006 | 601.24.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 0.68 | 52.0 | 4.23e-01 | 82.6% | 82.3% |
| 3762669 | 4970.1.1.16 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › TMEM218_N | 0.66 | 53.0 | 4.61e-01 | 92.8% | 57.1% |
| 4003615 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.63 | 54.0 | 3.85e-01 | 100.0% | 45.3% |
| 3608479 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 40.0 | 2.36e-01 | 71.0% | 19.5% |