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putative_CfxQ-like_protein

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

putative_CfxQ-like_protein__YP_003987259__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003987259 ↗
Protein ID:
putative_CfxQ-like_protein
Kingdom:
euk

Quality

73.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 143-300
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00004.36 best AAA 40.8 4.20e-10 82.9% 81.7%
D3 medium residues 92-142
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.66e-01 94.1% 81.8%
2dflA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.60 44.0 4.25e-01 90.2% 70.0%
3ei3A04 1.10.150.910 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.58 45.0 3.93e-01 90.2% 82.4%
4qjfB01 6.10.140.10 Special › Helix non-globular › Helix Hairpins › 0.55 44.0 4.33e-01 88.2% 85.2%
2rpaA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.55 43.0 3.90e-01 92.2% 62.3%
2d9dA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.53 45.0 3.75e-01 92.2% 70.8%
1r5aA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 42.0 3.11e-01 88.2% 34.6%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.52 41.0 3.91e-01 88.2% 93.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3223091 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.62 41.0 3.04e-01 82.4% 25.9%
3343502 109.4.1.1274 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long 0.51 38.0 2.27e-01 86.3% 22.9%