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putative_D5_family_NTPase_ATPase

Euk-Vir

Bohle_iridovirus

putative_D5_family_NTPase_ATPase__YP_009506682__Bohle_iridovirus__100220

Identity

Accession:: YP_009506682 ↗
Protein ID:: putative_D5_family_NTPase_ATPase
Kingdom:: euk

Quality

75.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Ranavirus› Bohle_iridovirus

TaxID: 100220

Cluster

View cluster (27 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 70-283

PDB

Domain cluster: rep: hypothetical_protein_H012_gp354__YP_007354538__Acanthamoeba_polyphaga_moumouvirus__1269028__D9-184

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23162.2 best	AEP_C962R	69.6	5.90e-19	65.4%	75.7%

D2 high residues 907-969

PDB

Domain cluster: rep: D5_family_NTPase_ATPase__YP_010084866__Shrimp_hemocyte_iridescent_virus__2039780__D809-878

D3 medium residues 1-69

PDB

Domain cluster: rep: hypothetical_protein_OtV2_070__YP_004063503__Ostreococcus_tauri_virus_2__696472__D1-57

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23162.2 best	AEP_C962R	27.6	4.40e-06	59.4%	22.7%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vk1A02	3.30.1760.10	Alpha Beta › 2-Layer Sandwich › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2	0.68	54.0	4.42e-01	87.0%	69.2%
6ztgA01	3.30.70.1070	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat	0.62	31.0	3.09e-01	81.2%	41.3%
1iejA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.54	43.0	3.51e-01	91.3%	86.0%
2nyiA02	3.30.70.260	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain	0.53	41.0	3.84e-01	87.0%	78.9%
2iboA00	3.30.70.930	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.52	38.0	3.54e-01	88.4%	61.8%
3gwiA00	3.40.1110.10	Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N	0.51	40.0	3.04e-01	85.5%	89.6%
1s7hA01	3.30.70.930	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.50	37.0	3.56e-01	88.4%	68.8%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
11004	5103.1.1.1 ↗	a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › DUF5603	0.68	54.0	4.78e-01	87.0%	89.0%
3411407	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.57	41.0	3.25e-01	76.8%	60.0%
3789193	109.4.1.560 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mus7	0.54	44.0	2.63e-01	95.7%	20.0%
3534502	109.4.1.1310 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N	0.53	44.0	2.50e-01	94.2%	12.9%
3806578	376.1.1.59 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-B_box	0.52	32.0	3.77e-01	72.5%	93.3%
3759578	904.1.1.1 ↗	few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box	0.51	31.0	3.28e-01	71.0%	68.3%
4608913	329.1.1.1 ↗	a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › GAD	0.51	35.0	2.96e-01	73.9%	62.4%
3970195	304.8.1.0 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like	0.51	39.0	3.60e-01	88.4%	71.6%
5019480	304.48.1.3 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B	0.50	40.0	2.38e-01	95.7%	48.7%

D4 medium residues 297-375

PDB

Domain cluster: rep: putative_primase__YP_009506829__Tunisvirus_fontaine2__1421067__D281-379

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08707.17 best	PriCT_2	69.3	4.30e-19	89.9%	90.9%

D5 medium residues 376-477_503-550

PDB

Domain cluster: rep: D5_family_helicase__YP_009173524__Chrysochromulina_ericina_virus__455364__D416-543

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08706.17 best	D5_N	49.0	1.20e-12	76.7%	56.5%

D6 medium residues 551-613

PDB

Domain cluster: rep: primase_D5__YP_009329716__BeAn_58058_virus__67082__D404-464

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08706.17 best	D5_N	44.0	3.90e-11	95.2%	28.6%

D7 medium residues 654-723_816-906

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

D8 medium residues 724-815

PDB

Domain cluster: rep: putative_D5_family_NTPase_ATPase__YP_031600__Frog_virus_3__10493__D723-807