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putative_DNA-binding_virion_protein

Euk-Vir

Parapoxvirus_red_deer_HL953

putative_DNA-binding_virion_protein__YP_009112769__Parapoxvirus_red_deer_HL953__1579460

Identity

Accession:
YP_009112769 ↗
Protein ID:
putative_DNA-binding_virion_protein
Kingdom:
euk

Quality

83.5 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Parapoxvirus› Parapoxvirus_red_deer/HL953

TaxID: 1579460

Cluster

View cluster (30 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-104
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03289.20 best Pox_I1 113.4 1.70e-32 100.0% 29.6%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8b70A01 1.20.1740.10 Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I 0.57 50.0 3.28e-01 100.0% 30.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3232804 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.51 29.0 3.62e-01 90.2% 94.5%
D2 medium residues 141-220
PDB
Domain cluster: rep: DNA-binding_core_protein__YP_009143378__Raccoonpox_virus__10256__D141-220
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03289.20 best Pox_I1 69.8 3.10e-19 100.0% 24.4%