putative_DNA-directed_RNA_polymerase_subunit_Rpb1

Euk-Vir

Tunisvirus_fontaine2

putative_DNA-directed_RNA_polymerase_subunit_Rpb1__YP_009507157__Tunisvirus_fontaine2__1421067

Identity

72.0 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Tunisvirus_fontaine2

TaxID: 1421067

View cluster (7 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-123_172-251

PDB

Domain cluster: rep: DNA-directed_RNA_polymerase_subunit_alpha__YP_009094548__Melbournevirus__1560514__D74-162_215-266

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04983.24 best	RNA_pol_Rpb1_3	62.7	5.50e-17	91.7%	93.2%

D2 high residues 463-552

PDB

Domain cluster: rep: RNA_polymerase_RPB1_large_subunit__YP_009345156__Noumeavirus__1955558__D935-1023

D3 high residues 649-808

PDB

D4 medium residues 294-419

PDB

Domain cluster: rep: IMGVR_UViG_3300026526_001751-3300026526-Ga0256869_10341511__D627-809

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05000.23 best	RNA_pol_Rpb1_4	52.6	5.60e-14	73.8%	79.4%
PF04998.23	RNA_pol_Rpb1_5	31.2	2.20e-07	21.4%	10.1%

D5 medium residues 420-462_556-609_851-899_919-931

PDB

Domain cluster: rep: DNA-directed_RNA_polymerase_subunit_alpha__YP_004346982__Lausannevirus__999883__D434-460_553-607_849-904

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04998.23 best	RNA_pol_Rpb1_5	68.9	7.10e-19	62.3%	36.3%
PF04998.23	RNA_pol_Rpb1_5	45.8	7.80e-12	39.6%	20.6%

D6 medium residues 610-648_810-850

PDB

Domain cluster: rep: DNA-directed_RNA_polymerase_subunit_alpha__YP_004346982__Lausannevirus__999883__D608-643_809-848