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putative_DNA_topoisomerase_II

Euk-Vir

Ostreococcus_tauri_virus_OtV5

putative_DNA_topoisomerase_II__YP_001648320__Ostreococcus_tauri_virus_OtV5__1785753

Identity

Accession:
YP_001648320 ↗
Protein ID:
putative_DNA_topoisomerase_II
Kingdom:
euk

Quality

89.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_tauri_virus_OtV5

TaxID: 1785753

Cluster

View cluster (39 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 244-382
PDB
Domain cluster: rep: DNA_gyrase_subunit_B__YP_009352802__Kaumoebavirus_Viruses.__X__D311-415
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00204.32 best DNA_gyraseB 52.5 6.10e-14 97.8% 56.9%
D2 high residues 393-535_571-662
PDB
Domain cluster: rep: DNA_topoisomerase_2__YP_009162467__Salmon_gill_poxvirus__1680908__D385-517_553-621_640-664
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01751.29 best Toprim 30.5 4.50e-07 49.4% 84.4%
PF16898.11 TOPRIM_C 73.1 3.50e-20 40.8% 67.2%
D3 high residues 959-1071
PDB
Domain cluster: rep: MH494197.1__AXC39168.1__X__00456__D116-252
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00521.27 best DNA_topoisoIV 33.6 3.00e-08 99.1% 26.5%
D4 medium residues 6-64_202-238
PDB
Domain cluster: rep: DNA_topoisomerase_II__YP_004063644__Ostreococcus_tauri_virus_2__696472__D23-57_206-238
D5 medium residues 65-201
PDB
Domain cluster: rep: GyrB-like_ATPase_domain_protein__YP_784274__Nile_crocodilepox_virus__1285600__D74-178
D6 medium residues 667-780
PDB
Domain cluster: rep: DNA_topoisomerase_2__YP_009162467__Salmon_gill_poxvirus__1680908__D669-796
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00521.27 best DNA_topoisoIV 138.8 3.40e-40 100.0% 25.8%
D7 medium residues 861-925
PDB
Domain cluster: rep: IMGVR_UViG_3300007985_000017-3300007985-Ga0100381_100027569__D212-299