putative_E9L_protein

Euk-Vir

Orthopoxvirus_Abatino

putative_E9L_protein__YP_010085734__Orthopoxvirus_Abatino__2478919

Identity

90.6 mean pLDDT

View cluster (158 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 162-344_439-473

PDB

Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_401712__Human_gammaherpesvirus_4__10376__D288-457

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03104.26 best	DNA_pol_B_exo1	81.6	8.50e-23	86.2%	71.5%
PF08408.17	DNA_pol_B_3	63.9	2.40e-17	37.2%	30.5%

D2 high residues 346-432

PDB

Domain cluster: rep: DNA_polymerase_elongation_subunit_family_B__YP_009162448__Salmon_gill_poxvirus__1680908__D388-474

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08408.17 best	DNA_pol_B_3	78.4	7.70e-22	95.4%	65.6%

D3 high residues 829-997

PDB

Domain cluster: rep: IMGVR_UViG_3300021255_003095-3300021255-Ga0223825_1010595139__D209-342

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	115.4	4.30e-33	93.5%	32.9%

D4 medium residues 523-551_703-827

PDB

Domain cluster: rep: NC_004735.1__NP_835679.1__Rm378p092__00092__D1-33_185-289

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	98.7	4.90e-28	71.4%	18.8%
PF00136.27	DNA_pol_B	25.5	8.00e-06	19.5%	5.7%

D5 medium residues 552-603_680-702

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	30.3	2.70e-07	72.0%	8.6%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1te2A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.70	38.0	3.90e-01	96.0%	55.6%
1miwA04	1.10.246.80	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 ›	0.68	35.0	3.74e-01	100.0%	57.8%
3jvoA00	1.10.3230.30	Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › Phage gp6-like head-tail connector protein	0.65	37.0	3.41e-01	100.0%	44.8%
3nbiA01	1.10.8.1020	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain	0.64	34.0	3.81e-01	100.0%	65.5%
1fs0G02	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.59	36.0	3.39e-01	93.3%	51.7%
4v19K02	1.10.10.250	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain	0.59	34.0	3.47e-01	96.0%	56.0%
2bskB00	1.10.287.810	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains	0.58	39.0	4.16e-01	100.0%	80.0%
3g0tA02	6.10.120.10	Special › Helix non-globular › 434 Repressor (Amino-terminal Domain) › Bacterial aspartate aminotransferase, helical domain	0.51	40.0	4.11e-01	96.0%	91.4%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4260426	3718.1.1.1 ↗	alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT	0.69	34.0	3.07e-01	94.7%	36.0%
4942789	4323.1.1.0 ↗	alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C	0.61	35.0	2.84e-01	94.7%	31.4%
4388669	4156.1.1.6 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc	0.55	38.0	2.82e-01	72.0%	43.6%
4960923	4156.1.1.6 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc	0.55	38.0	3.02e-01	72.0%	56.7%
3640659	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.53	39.0	2.63e-01	78.7%	34.9%
3608693	632.1.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain	0.50	39.0	3.48e-01	82.7%	88.6%

D6 medium residues 604-679

PDB

Domain cluster: rep: hypothetical_protein_FR483_N023L__YP_001425655__Paramecium_bursaria_Chlorella_virus_FR483__399781__D557-623

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	84.6	9.50e-24	97.4%	14.1%