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putative_EGF-like_domain-containing_protein
Euk-VirAcanthamoeba_polyphaga_mimivirus
putative_EGF-like_domain-containing_protein__YP_003987180__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003987180 ↗
- Protein ID:
- putative_EGF-like_domain-containing_protein
- Kingdom:
- euk
Quality
70.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (17 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 78-228
D2
high
residues 232-303
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF28386.1 best | BfoA_C | 45.1 | 1.80e-11 | 100.0% | 57.4% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b89A01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.66 | 43.0 | 4.92e-01 | 95.8% | 90.7% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.63 | 40.0 | 4.49e-01 | 97.2% | 95.8% |
| 3op0A01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.61 | 52.0 | 4.34e-01 | 100.0% | 81.6% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.59 | 49.0 | 3.86e-01 | 91.7% | 95.4% |
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 41.0 | 3.76e-01 | 100.0% | 55.0% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 40.0 | 3.43e-01 | 100.0% | 43.9% |
| 7kypB01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.57 | 46.0 | 3.16e-01 | 91.7% | 26.0% |
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 40.0 | 3.52e-01 | 100.0% | 50.9% |
| 6j8eA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.56 | 43.0 | 3.82e-01 | 84.7% | 57.5% |
| 3cuxA02 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.56 | 43.0 | 3.69e-01 | 84.7% | 60.3% |
| 3spcA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 40.0 | 3.37e-01 | 77.8% | 59.8% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 38.0 | 3.41e-01 | 75.0% | 61.2% |
| 4lp8A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 40.0 | 3.49e-01 | 77.8% | 57.7% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.53 | 44.0 | 4.07e-01 | 94.4% | 96.9% |
| 3k53A02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 38.0 | 3.48e-01 | 76.4% | 93.9% |
| 1bjfA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 43.0 | 4.04e-01 | 91.7% | 79.8% |
| 6ig5A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.53 | 42.0 | 3.50e-01 | 91.7% | 76.1% |
| 1nhwC00 | 1.10.8.400 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Enoyl acyl carrier protein reductase | 0.52 | 34.0 | 3.67e-01 | 80.6% | 83.3% |
| 1epuA03 | 1.25.40.60 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 39.0 | 3.34e-01 | 84.7% | 89.5% |
| 1u5kA02 | 1.20.1440.120 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Recombination protein O, C-terminal domain | 0.51 | 41.0 | 3.49e-01 | 91.7% | 83.2% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3395749 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.62 | 41.0 | 3.35e-01 | 100.0% | 37.0% |
| 3490223 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.60 | 43.0 | 2.86e-01 | 100.0% | 18.9% |
| 4193968 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.59 | 42.0 | 3.79e-01 | 100.0% | 54.0% |
| 3487164 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.59 | 42.0 | 2.86e-01 | 100.0% | 19.6% |
| 4789617 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.59 | 40.0 | 3.69e-01 | 100.0% | 54.3% |
| 4974088 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.58 | 41.0 | 2.82e-01 | 100.0% | 20.4% |
| 3777935 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.58 | 41.0 | 2.78e-01 | 100.0% | 19.0% |
| 3933686 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.58 | 42.0 | 2.76e-01 | 100.0% | 18.0% |
| 3994472 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.58 | 41.0 | 2.73e-01 | 100.0% | 17.5% |
| 4959108 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.58 | 41.0 | 2.87e-01 | 100.0% | 22.0% |
| 3585613 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.58 | 42.0 | 3.00e-01 | 100.0% | 26.0% |
| 3485131 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.57 | 41.0 | 2.64e-01 | 100.0% | 15.5% |
| 4919 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.57 | 40.0 | 3.16e-01 | 100.0% | 33.8% |
| 3259816 | 592.6.1.2 ↗ | alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › PF26582 | 0.57 | 40.0 | 3.52e-01 | 84.7% | 48.2% |
| 3517641 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.57 | 39.0 | 2.68e-01 | 100.0% | 21.7% |
| 4918 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.56 | 41.0 | 3.71e-01 | 100.0% | 55.3% |
| 4012536 | 3252.2.1.0 ↗ | alpha arrays › SHQ1 C-terminal domain-like › Anaphase-promoting complex subunit 5 N-terminal domain › Anaphase-promoting complex subunit 5 N-terminal domain | 0.56 | 41.0 | 2.96e-01 | 77.8% | 51.8% |
| 2820015 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.56 | 40.0 | 3.50e-01 | 100.0% | 47.8% |
| 2846829 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.56 | 41.0 | 3.83e-01 | 83.3% | 62.6% |
| 3882854 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.56 | 42.0 | 2.74e-01 | 100.0% | 18.1% |
| 3394199 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 36.0 | 2.97e-01 | 84.7% | 35.0% |
| 3506917 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.55 | 39.0 | 2.84e-01 | 100.0% | 25.6% |
| 3496011 | 189.1.1.0 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP | 0.55 | 39.0 | 2.59e-01 | 76.4% | 84.8% |
| 3658585 | 109.4.1.80 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3 | 0.55 | 38.0 | 3.21e-01 | 75.0% | 46.7% |
| 353472 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.55 | 40.0 | 3.45e-01 | 77.8% | 52.2% |
| 4976125 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 38.0 | 3.37e-01 | 100.0% | 49.5% |
| 3257271 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.54 | 38.0 | 3.53e-01 | 100.0% | 55.8% |
| 3629471 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.54 | 41.0 | 2.94e-01 | 100.0% | 28.1% |
| 3281388 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.54 | 40.0 | 2.88e-01 | 100.0% | 26.5% |
| 3350604 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.53 | 38.0 | 3.51e-01 | 76.4% | 65.3% |
| 3905731 | 601.11.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Perilipin | 0.52 | 41.0 | 3.05e-01 | 91.7% | 62.7% |
| 1036939 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.52 | 38.0 | 3.56e-01 | 100.0% | 62.6% |
| 4959289 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.52 | 35.0 | 3.29e-01 | 72.2% | 94.7% |
| 5062467 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.51 | 36.0 | 3.46e-01 | 75.0% | 68.2% |
| 5079090 | 3625.1.1.0 ↗ | alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain | 0.51 | 37.0 | 3.29e-01 | 80.6% | 92.2% |
| 1788534 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.51 | 38.0 | 3.31e-01 | 98.6% | 50.9% |
| 4365538 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.51 | 42.0 | 3.20e-01 | 100.0% | 82.9% |
| 1758759 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.51 | 39.0 | 2.80e-01 | 84.7% | 41.3% |
| 4953716 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.50 | 35.0 | 3.26e-01 | 75.0% | 64.2% |
D3
medium
residues 466-525