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putative_FNIP_repeat-containing_protein
Euk-VirAcanthamoeba_polyphaga_mimivirus
putative_FNIP_repeat-containing_protein__YP_003987156__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003987156 ↗
- Protein ID:
- putative_FNIP_repeat-containing_protein
- Kingdom:
- euk
Quality
76.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-67
Domain cluster:
rep: FNIP_repeat-containing_protein__YP_007354837__Acanthamoeba_polyphaga_moumouvirus__1269028__D1-56
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fs2A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 59.0 | 3.95e-01 | 100.0% | 30.1% |
| 5ibkB00 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.67 | 46.0 | 5.12e-01 | 93.5% | 97.8% |
| 8gpvA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.63 | 52.0 | 4.10e-01 | 91.9% | 60.5% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 45.0 | 3.63e-01 | 93.5% | 89.2% |
| 1t1jA00 | 3.40.50.10400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein PA1492 | 0.55 | 38.0 | 3.13e-01 | 72.6% | 51.3% |
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.54 | 43.0 | 3.31e-01 | 90.3% | 55.1% |
| 3kd4A02 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.52 | 40.0 | 3.19e-01 | 93.5% | 84.4% |
| 3lu2A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 43.0 | 2.86e-01 | 100.0% | 30.1% |
| 2x5oA03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.52 | 40.0 | 3.29e-01 | 90.3% | 64.4% |
| 2mw2A00 | 1.20.1280.40 | Mainly Alpha › Up-down Bundle › Monooxygenase › HHA | 0.50 | 39.0 | 3.83e-01 | 88.7% | 100.0% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3447933 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.80 | 54.0 | 5.54e-01 | 71.0% | 78.3% |
| 3418997 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.80 | 50.0 | 5.84e-01 | 93.5% | 100.0% |
| 3668090 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.78 | 69.0 | 3.68e-01 | 100.0% | 6.2% |
| 3811913 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.77 | 54.0 | 5.86e-01 | 72.6% | 96.0% |
| 3646855 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.77 | 50.0 | 5.66e-01 | 90.3% | 91.1% |
| 3426923 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.77 | 49.0 | 5.71e-01 | 93.5% | 100.0% |
| 3461043 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.74 | 64.0 | 5.27e-01 | 100.0% | 72.9% |
| 3660387 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.74 | 65.0 | 4.07e-01 | 100.0% | 24.2% |
| 3435692 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.73 | 64.0 | 3.82e-01 | 100.0% | 20.0% |
| 3259075 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.73 | 57.0 | 5.32e-01 | 85.5% | 100.0% |
| 3803880 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.73 | 64.0 | 3.92e-01 | 100.0% | 27.3% |
| 2774506 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.73 | 50.0 | 5.09e-01 | 71.0% | 79.7% |
| 3439545 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.73 | 64.0 | 3.82e-01 | 100.0% | 24.4% |
| 3994058 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.73 | 63.0 | 4.17e-01 | 100.0% | 28.9% |
| 3682581 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 63.0 | 3.75e-01 | 100.0% | 22.9% |
| 3652308 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 63.0 | 3.78e-01 | 100.0% | 15.6% |
| 3579123 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 62.0 | 3.94e-01 | 96.8% | 26.9% |
| 3236496 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 61.0 | 4.05e-01 | 96.8% | 29.6% |
| 3495709 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.71 | 62.0 | 3.63e-01 | 100.0% | 20.4% |
| 3881437 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 61.0 | 3.79e-01 | 100.0% | 21.6% |
| 3236811 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.71 | 48.0 | 5.35e-01 | 96.8% | 97.8% |
| 3916235 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 61.0 | 3.98e-01 | 98.4% | 26.7% |
| 4013834 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.71 | 52.0 | 5.04e-01 | 79.0% | 84.3% |
| 3435318 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 61.0 | 3.71e-01 | 100.0% | 20.5% |
| 3833312 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 59.0 | 3.53e-01 | 95.2% | 18.5% |
| 3346411 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.71 | 62.0 | 3.82e-01 | 100.0% | 24.6% |
| 3429654 | 207.1.1.192 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1, LRR_At5g56370 | 0.71 | 61.0 | 3.67e-01 | 100.0% | 19.5% |
| 3219544 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 59.0 | 3.80e-01 | 95.2% | 36.8% |
| 3907153 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.70 | 60.0 | 3.66e-01 | 100.0% | 18.7% |
| 3317266 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.70 | 60.0 | 3.70e-01 | 96.8% | 33.5% |
| 3213262 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.70 | 59.0 | 5.09e-01 | 95.2% | 95.0% |
| 3239855 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.70 | 47.0 | 5.17e-01 | 98.4% | 97.8% |
| 3454205 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 58.0 | 3.54e-01 | 95.2% | 20.9% |
| 3236326 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.70 | 44.0 | 5.14e-01 | 93.5% | 100.0% |
| 3222725 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 59.0 | 3.87e-01 | 100.0% | 37.0% |
| 3824399 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 59.0 | 3.72e-01 | 96.8% | 27.9% |
| 3680688 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.69 | 60.0 | 3.64e-01 | 100.0% | 16.2% |
| 3568315 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 58.0 | 3.95e-01 | 100.0% | 29.4% |
| None | — | 0.69 | 58.0 | 3.57e-01 | 98.4% | 18.0% | |
| 3769778 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 58.0 | 3.90e-01 | 100.0% | 28.7% |
| 3239938 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.68 | 60.0 | 3.76e-01 | 100.0% | 27.8% |
| 3852694 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.68 | 56.0 | 3.86e-01 | 96.8% | 30.0% |
| 3729210 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.68 | 58.0 | 3.42e-01 | 100.0% | 13.8% |
| 3456290 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.68 | 56.0 | 5.41e-01 | 93.5% | 95.7% |
| 3421229 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.67 | 58.0 | 3.53e-01 | 100.0% | 17.4% |
| 3369955 | 207.1.1.192 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1, LRR_At5g56370 | 0.67 | 57.0 | 3.47e-01 | 100.0% | 17.4% |
| None | — | 0.67 | 58.0 | 3.54e-01 | 100.0% | 21.7% | |
| 3671978 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.67 | 57.0 | 3.43e-01 | 98.4% | 21.1% |
| 3228478 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.67 | 55.0 | 4.42e-01 | 96.8% | 78.5% |
| 3421589 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.66 | 57.0 | 3.51e-01 | 100.0% | 25.4% |
| 3230376 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 56.0 | 3.38e-01 | 100.0% | 20.4% |
| 3463813 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.66 | 55.0 | 3.47e-01 | 96.8% | 24.9% |
| 3300879 | 207.1.1.96 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 | 0.66 | 56.0 | 3.47e-01 | 100.0% | 25.7% |
| 3664364 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.65 | 55.0 | 5.59e-01 | 100.0% | 95.0% |
| 3371359 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 55.0 | 3.38e-01 | 100.0% | 22.6% |
| 3817885 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 55.0 | 3.35e-01 | 100.0% | 19.6% |
| 3424908 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.64 | 55.0 | 4.65e-01 | 98.4% | 86.1% |
| 4073598 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.64 | 50.0 | 4.99e-01 | 96.8% | 81.5% |
| 3355899 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.64 | 55.0 | 4.99e-01 | 96.8% | 96.5% |
| 3242274 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.63 | 45.0 | 4.25e-01 | 79.0% | 62.7% |
| 3726236 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.63 | 55.0 | 4.93e-01 | 96.8% | 84.7% |
| 3233144 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.63 | 53.0 | 4.18e-01 | 100.0% | 86.9% |
| 3726840 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.63 | 55.0 | 5.22e-01 | 100.0% | 96.0% |
| 3425088 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.61 | 54.0 | 5.35e-01 | 95.2% | 92.3% |
| 3272348 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.60 | 51.0 | 4.38e-01 | 98.4% | 89.5% |
| 3348676 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 52.0 | 3.19e-01 | 98.4% | 33.3% |
| 4022808 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.60 | 51.0 | 3.52e-01 | 100.0% | 30.9% |
| 3725419 | 148.1.3.268 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › F-box | 0.58 | 49.0 | 3.10e-01 | 95.2% | 29.4% |
| 3803973 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.55 | 46.0 | 4.52e-01 | 96.8% | 95.7% |
| 3815035 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.55 | 38.0 | 3.07e-01 | 74.2% | 63.7% |
D2
medium
residues 74-235
Domain cluster:
rep: FNIP_repeat-containing_protein__YP_007354770__Acanthamoeba_polyphaga_moumouvirus__1269028__D44-172
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05725.19 best | FNIP | 36.9 | 4.30e-09 | 25.9% | 95.5% |
| PF05725.19 | FNIP | 43.3 | 4.30e-11 | 25.3% | 95.5% |
| PF05725.19 | FNIP | 21.9 | 2.20e-04 | 16.1% | 61.4% |
D3
medium
residues 236-394