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putative_GDP-mannose_4,6-dehydratase
Euk-VirOstreococcus_tauri_virus_2
putative_GDP-mannose_4,6-dehydratase__YP_004063440__Ostreococcus_tauri_virus_2__696472
Identity
- Accession:
- YP_004063440 ↗
- Protein ID:
- putative_GDP-mannose_4,6-dehydratase
- Kingdom:
- euk
Quality
93.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Ostreococcus_tauri_virus_2
TaxID: 696472
Cluster
View cluster (115 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-176_217-240
Domain cluster:
rep: NC_043427__YP_009666084.1__FK997-gp39__00039__D5-203_243-266_355-370
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04321.24 best | RmlD_sub_bind | 35.0 | 1.20e-08 | 99.5% | 58.2% |
| PF01370.28 | Epimerase | 152.6 | 1.70e-44 | 87.3% | 71.2% |
| PF16363.12 | GDP_Man_Dehyd | 206.9 | 8.10e-61 | 86.8% | 55.1% |
D2
high
residues 186-216_244-294_314-324
Domain cluster:
rep: GDP-D-mannose_dehydratase__YP_009325563__Only_Syngen_Nebraska_virus_5__1917232__D190-218_249-308_329-344
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16363.12 best | GDP_Man_Dehyd | 27.3 | 3.40e-06 | 64.5% | 16.3% |