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putative_IMV_membrane_protein

Euk-Vir

Parapoxvirus_red_deer_HL953

putative_IMV_membrane_protein__YP_009112830__Parapoxvirus_red_deer_HL953__1579460

Identity

Accession:
YP_009112830 ↗
Protein ID:
putative_IMV_membrane_protein
Kingdom:
euk

Quality

77.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Parapoxvirus› Parapoxvirus_red_deer/HL953

TaxID: 1579460

Cluster

View cluster (21 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-52
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06269.18 best DUF1029 73.0 2.40e-20 100.0% 86.8%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jvtA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.85 68.0 7.08e-01 89.1% 100.0%
2j5iA02 6.10.250.2850 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.83 63.0 6.80e-01 82.6% 100.0%
7a0hA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.81 58.0 4.51e-01 80.4% 35.6%
2vx2G02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.79 65.0 6.16e-01 91.3% 76.4%
1zkdA03 6.10.250.3300 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.77 56.0 5.80e-01 78.3% 86.0%
3l3sA02 1.10.287.2460 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.77 54.0 5.80e-01 82.6% 97.2%
3caxA01 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.76 65.0 4.21e-01 100.0% 37.8%
6ofuA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.74 63.0 3.91e-01 95.7% 24.7%
3on3B00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.72 59.0 3.99e-01 95.7% 24.6%
4djgB00 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.72 53.0 5.35e-01 82.6% 78.7%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.70 60.0 5.52e-01 95.7% 74.6%
1eg3A02 6.10.140.70 Special › Helix non-globular › Helix Hairpins › 0.69 49.0 4.83e-01 76.1% 71.4%
2psmA00 1.20.1250.70 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 0.69 54.0 4.04e-01 93.5% 34.2%
3ne5B04 6.10.140.730 Special › Helix non-globular › Helix Hairpins › 0.69 48.0 4.71e-01 82.6% 68.6%
2ckoA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.69 58.0 3.62e-01 100.0% 72.4%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.68 56.0 5.43e-01 100.0% 82.4%
4qfeK02 1.10.287.2460 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 46.0 4.90e-01 80.4% 100.0%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 50.0 3.93e-01 89.1% 38.8%
2y1vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 50.0 3.38e-01 93.5% 26.5%
2j4bB00 1.25.40.500 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain 0.61 49.0 3.73e-01 100.0% 57.9%
4bhxB00 1.10.4020.10 Mainly Alpha › Orthogonal Bundle › DNA breaking-rejoining enzymes fold › DNA breaking-rejoining enzymes 0.58 49.0 3.93e-01 95.7% 63.0%
3iwfB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.62e-01 95.7% 95.5%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.55 44.0 3.73e-01 97.8% 51.7%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 41.0 3.91e-01 84.8% 78.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4585924 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.90 74.0 7.51e-01 89.1% 91.1%
4969335 3352.1.1.0 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.80 68.0 4.07e-01 100.0% 13.3%
3336158 70.3.1.0 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like 0.74 61.0 4.24e-01 93.5% 28.4%
1821875 4970.1.1.1 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_B 0.72 59.0 5.42e-01 95.7% 69.5%
3180974 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 60.0 5.77e-01 100.0% 83.6%
4994339 601.5.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Colicin D immunity protein › Colicin D immunity protein 0.69 50.0 4.45e-01 80.4% 57.1%
5052064 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.63 53.0 3.35e-01 95.7% 43.1%
4322913 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.63 48.0 5.09e-01 89.1% 100.0%