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putative_L1_protein
Euk-VirFelis_catus_papillomavirus_4
putative_L1_protein__YP_008574816__Felis_catus_papillomavirus_4__1398507
Identity
- Accession:
- YP_008574816 ↗
- Protein ID:
- putative_L1_protein
- Kingdom:
- euk
Quality
80.1
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Taupapillomavirus›
Felis_catus_papillomavirus_4
TaxID: 1398507
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-118_317-327_329-398_454-478
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 142.9 | 2.10e-41 | 44.8% | 17.5% |
| PF00500.25 | Late_protein_L1 | 103.1 | 2.40e-29 | 43.2% | 16.7% |
| PF00500.25 | Late_protein_L1 | 28.7 | 8.80e-07 | 13.5% | 4.8% |
D2
high
residues 124-177_192-275_291-305
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 206.2 | 1.30e-60 | 98.7% | 30.6% |