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putative_NS5A
Euk-VirGB_virus-D
putative_NS5A__YP_009256194_putative_NS5A__GB_virus-D__2847088
Identity
- Accession:
- YP_009256194_putative_NS5A ↗
- Protein ID:
- putative_NS5A
- Kingdom:
- euk
Quality
52.4
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Pegivirus›
GB_virus-D
TaxID: 2847088
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-104
Domain cluster:
rep: nonstructural_protein_NS5A__YP_009664181__Hepacivirus_K__2008770__D43-101
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08300.19 best | HCV_NS5a_1a | 44.2 | 2.30e-11 | 74.3% | 62.9% |
D2
medium
residues 105-195
Domain cluster:
rep: nonstructural_protein_NS5A__YP_009179227_nonstructural_protein_NS5A__Wenling_shark_virus__1746066__D111-203
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08301.19 best | HCV_NS5a_1b | 35.8 | 1.40e-08 | 96.7% | 82.3% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fqmA02 | 2.20.25.220 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C virus NS5A, 1B domain | 0.78 | 67.0 | 6.88e-01 | 94.5% | 96.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 283055 | 926.1.1.2 ↗ | few secondary structure elements › HCV NS5A domain I subdomains › HCV NS5A domain I subdomains › HCV NS5A domain I subdomains › HCV_NS5a_1b | 0.76 | 67.0 | 6.71e-01 | 98.9% | 92.6% |
| 224047 | 6043.1.1.3 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N | 0.54 | 26.0 | 2.99e-01 | 93.4% | 59.1% |