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putative_NS5A_protein
Euk-VirGB_virus_C
putative_NS5A_protein__NP_803208__GB_virus_C__54290
Identity
- Accession:
- NP_803208 ↗
- Protein ID:
- putative_NS5A_protein
- Kingdom:
- euk
Quality
59.8
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Pegivirus›
GB_virus_C
TaxID: 54290
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 333-409
D2
medium
residues 46-93
Domain cluster:
rep: nonstructural_protein_NS5A__YP_009664181__Hepacivirus_K__2008770__D43-101
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08300.19 best | HCV_NS5a_1a | 42.2 | 9.60e-11 | 97.9% | 66.1% |
D3
medium
residues 105-188
Domain cluster:
rep: nonstructural_protein_NS5A__YP_009179227_nonstructural_protein_NS5A__Wenling_shark_virus__1746066__D111-203
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08301.19 best | HCV_NS5a_1b | 96.1 | 2.30e-27 | 100.0% | 84.3% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fqmA02 | 2.20.25.220 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C virus NS5A, 1B domain | 0.74 | 64.0 | 6.42e-01 | 98.8% | 93.0% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 37.0 | 3.86e-01 | 100.0% | 85.1% |