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putative_NTPase

Euk-Vir

Bohle_iridovirus

putative_NTPase__YP_009506669__Bohle_iridovirus__100220

Identity

Accession:: YP_009506669 ↗
Protein ID:: putative_NTPase
Kingdom:: euk

Quality

73.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Ranavirus› Bohle_iridovirus

TaxID: 100220

Cluster

View cluster (26 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 809-933

PDB

Domain cluster: rep: SWI_SNF2_family_helicase__YP_010087923__Lymphocystis_disease_virus_4__2704413__D840-928

D2 medium residues 66-277

PDB

Domain cluster: rep: SWI_SNF2_family_helicase_protein__YP_009342180__Lymphocystis_disease_virus_Sa__1898060__D47-271_530-554

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00176.30 best	SNF2-rel_dom	35.7	7.20e-09	86.3%	56.2%
PF04851.22	ResIII	47.5	2.80e-12	75.5%	84.2%

D3 medium residues 306-366

PDB

Domain cluster: rep: SWI_SNF2_family_helicase__YP_009021162__Anopheles_minimus_iridovirus__1465751__D285-356

D4 medium residues 525-586

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4wr4A02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.59	48.0	4.17e-01	96.8%	80.0%
1r3dA00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.52	40.0	2.73e-01	87.1%	23.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3975800	5065.1.1.2 ↗	alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD	0.66	55.0	3.48e-01	93.5%	88.9%
3391972	2485.1.1.0 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like	0.55	46.0	3.20e-01	100.0%	54.0%

D5 medium residues 732-795

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1m5q102	3.30.310.60	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Like-Sm ribonucleoprotein, C-terminal domain	0.58	36.0	3.74e-01	82.8%	69.0%
2mk5A00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.54	42.0	3.47e-01	89.1%	79.4%
1vjvA01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.54	45.0	3.00e-01	96.9%	93.7%
4hs5A00	3.30.920.10	Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY	0.53	39.0	3.40e-01	81.2%	53.3%
1vavA00	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.52	38.0	2.64e-01	78.1%	98.2%
1f7uA01	3.40.50.620	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs	0.52	36.0	2.32e-01	73.4%	27.7%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3739664	247.1.1.38 ↗	a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C	0.59	39.0	3.86e-01	81.2%	64.3%
4804032	4963.1.2.1 ↗	alpha complex topology › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal domain in vesicular stomatitis virus RNA polymerase L › Mononeg_RNA_pol	0.58	43.0	3.03e-01	89.1%	23.6%
4174964	10.12.1.0 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix	0.56	40.0	2.99e-01	78.1%	90.3%
4357938	10.12.1.154 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer, ManC_GMP_beta-helix	0.56	40.0	3.01e-01	78.1%	94.9%
4949707	10.12.1.98 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer	0.55	40.0	2.92e-01	78.1%	92.2%
3973004	208.4.1.0 ↗	beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain › Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain	0.53	38.0	2.79e-01	78.1%	86.5%
223484	241.2.1.1 ↗	a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay	0.53	39.0	3.40e-01	81.2%	53.3%
3740252	216.1.1.4 ↗	a+b two layers › UBC-like › UBC-like › UBC-like › RWD	0.53	37.0	3.17e-01	76.6%	54.8%
5044949	241.9.1.0 ↗	a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like	0.52	37.0	3.18e-01	78.1%	75.8%
3878330	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.50	34.0	3.11e-01	73.4%	89.5%