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putative_ORF1
Euk-VirRodent_Torque_teno_virus_7
putative_ORF1__YP_009553018__Rodent_Torque_teno_virus_7__2054614
Identity
- Accession:
- YP_009553018 ↗
- Protein ID:
- putative_ORF1
- Kingdom:
- euk
Quality
65.8
mean pLDDT
Taxonomy
Shotokuvirae›
Commensaviricota›
Cardeaviricetes›
Sanitavirales›
Anelloviridae›
Wawtorquevirus›
Rodent_Torque_teno_virus_7
TaxID: 2054614
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 252-389
Domain cluster:
rep: putative_ORF1__YP_009551913__Rodent_Torque_teno_virus_4__2054611__D201-338
D2
medium
residues 70-106_120-147_206-224_400-421
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 59.0 | 4.20e-01 | 100.0% | 77.8% |
| 4nzjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 37.0 | 4.03e-01 | 93.4% | 77.0% |
| 3fcsA03 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.58 | 43.0 | 3.96e-01 | 100.0% | 60.4% |
| 1j0hA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 34.0 | 3.74e-01 | 92.5% | 73.5% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 3.70e-01 | 100.0% | 90.0% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 47.0 | 3.93e-01 | 97.2% | 87.6% |
| 2g23K04 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.54 | 42.0 | 3.45e-01 | 100.0% | 46.3% |
| 4indA03 | 2.60.120.1330 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 47.0 | 4.55e-01 | 97.2% | 96.6% |
| 3qs2A00 | 2.60.40.3290 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial protein EcpA | 0.50 | 43.0 | 3.73e-01 | 96.2% | 98.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3236150 | 11.1.5.84 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › ERMP1_C | 0.58 | 39.0 | 3.04e-01 | 100.0% | 30.4% |
| 3212038 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.54 | 48.0 | 4.38e-01 | 98.1% | 95.7% |
| 3801696 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 36.0 | 3.70e-01 | 95.3% | 72.0% |
| 3681665 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 38.0 | 3.49e-01 | 100.0% | 56.4% |
| 1298682 | 10.32.1.168 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › HA70_C | 0.53 | 40.0 | 3.71e-01 | 100.0% | 62.7% |
| 3733530 | 304.133.1.0 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein | 0.53 | 41.0 | 4.41e-01 | 97.2% | 97.8% |
D3
medium
residues 107-119_148-205_225-239
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mzuF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 46.0 | 3.85e-01 | 97.7% | 40.5% |
| 2oa2A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 47.0 | 4.21e-01 | 98.8% | 51.2% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 60.0 | 4.81e-01 | 98.8% | 75.1% |
| 4o9gA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 46.0 | 3.89e-01 | 97.7% | 44.2% |
| 6nwmA01 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.66 | 42.0 | 3.46e-01 | 100.0% | 36.1% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 56.0 | 4.13e-01 | 100.0% | 51.7% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.62 | 46.0 | 4.46e-01 | 98.8% | 69.4% |
| 2w2iC00 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.60 | 53.0 | 3.58e-01 | 97.7% | 50.6% |
| 3m70A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 44.0 | 4.16e-01 | 100.0% | 65.1% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 43.0 | 3.88e-01 | 100.0% | 57.7% |
| 6m9sD01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 47.0 | 4.45e-01 | 100.0% | 77.2% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.55 | 47.0 | 3.99e-01 | 97.7% | 66.4% |
| 3t30C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.54 | 42.0 | 4.12e-01 | 97.7% | 77.9% |
| 3fmgA02 | 2.60.120.800 | Mainly Beta › Sandwich › Jelly Rolls › Rotavirus outer-layer protein VP7, domain 2 | 0.54 | 41.0 | 4.15e-01 | 95.3% | 83.9% |
| 1xe0C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.54 | 45.0 | 4.26e-01 | 96.5% | 78.2% |
| 2qfeA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 43.0 | 3.77e-01 | 100.0% | 56.1% |
| 4gpvA01 | 2.60.40.2580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 40.0 | 3.48e-01 | 82.6% | 65.7% |
| 3seeA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 46.0 | 3.51e-01 | 100.0% | 77.1% |
| 3w5mA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 4.02e-01 | 97.7% | 69.2% |
| 3tvzB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 34.0 | 2.96e-01 | 97.7% | 42.3% |
| 4cu9A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 3.66e-01 | 100.0% | 64.2% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 3.81e-01 | 100.0% | 99.4% |
| 1flkA00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.51 | 44.0 | 3.34e-01 | 95.3% | 74.1% |
| 5mw5A01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 39.0 | 3.32e-01 | 84.9% | 63.6% |
| 2ozjA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 41.0 | 3.82e-01 | 97.7% | 69.7% |
| 6nu8A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.50 | 42.0 | 3.59e-01 | 94.2% | 83.2% |
| 5ufvA00 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.50 | 43.0 | 3.24e-01 | 98.8% | 79.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3511214 | 10.12.1.104 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding, Cupin_2 | 0.68 | 43.0 | 3.60e-01 | 98.8% | 37.3% |
| 4937858 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.65 | 50.0 | 4.61e-01 | 97.7% | 63.6% |
| 4955697 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.65 | 44.0 | 4.14e-01 | 100.0% | 57.1% |
| 3309424 | 10.12.1.31 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_5 | 0.63 | 48.0 | 3.62e-01 | 98.8% | 34.9% |
| 3394622 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 56.0 | 5.14e-01 | 100.0% | 77.3% |
| 3257190 | 10.12.1.101 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8 | 0.62 | 54.0 | 3.73e-01 | 97.7% | 49.0% |
| 5018960 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.61 | 41.0 | 3.63e-01 | 100.0% | 47.2% |
| 3172591 | 10.12.1.9 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC | 0.60 | 53.0 | 3.54e-01 | 97.7% | 51.3% |
| 3718257 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 53.0 | 4.36e-01 | 100.0% | 76.2% |
| 3731894 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 45.0 | 4.32e-01 | 97.7% | 74.0% |
| 3849254 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 49.0 | 4.56e-01 | 96.5% | 77.3% |
| 2512620 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 47.0 | 4.42e-01 | 100.0% | 76.7% |
| 4999321 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 4.03e-01 | 84.9% | 81.0% |
| 2330288 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.55 | 45.0 | 3.39e-01 | 98.8% | 36.0% |
| 3641999 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.55 | 49.0 | 4.21e-01 | 98.8% | 98.5% |
| 4089840 | 11.1.1.577 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PFF1_C | 0.55 | 46.0 | 3.62e-01 | 96.5% | 51.5% |
| 4979803 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 43.0 | 4.10e-01 | 100.0% | 71.4% |
| 3493267 | 10.32.1.21 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PAW | 0.55 | 48.0 | 3.63e-01 | 100.0% | 45.0% |
| 3208937 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 47.0 | 4.36e-01 | 98.8% | 79.1% |
| 4023117 | 10.32.1.206 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PTM1-like_N | 0.53 | 46.0 | 4.14e-01 | 97.7% | 84.0% |
| 3497913 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.53 | 47.0 | 3.42e-01 | 100.0% | 49.4% |
| 3397231 | 10.2.1.18 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monooxygen | 0.53 | 45.0 | 3.78e-01 | 100.0% | 66.3% |
| 146648 | 10.23.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in outer capsid glycoprotein VP7 › Jelly-roll domain in outer capsid glycoprotein VP7 › VP7 | 0.53 | 41.0 | 4.03e-01 | 94.2% | 78.7% |
| 4519672 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.52 | 45.0 | 3.82e-01 | 95.3% | 84.3% |
| 3214839 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.52 | 46.0 | 3.77e-01 | 100.0% | 90.0% |
| 3303761 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.51 | 46.0 | 3.53e-01 | 100.0% | 45.1% |
| 3941285 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.51 | 45.0 | 3.37e-01 | 100.0% | 58.6% |
| 3515983 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.51 | 44.0 | 3.40e-01 | 100.0% | 57.6% |
| 4968615 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.50 | 42.0 | 3.73e-01 | 97.7% | 74.1% |