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putative_RNA-dependent_RNA_polymerase

Euk-Vir

Otarine_picobirnavirus

putative_RNA-dependent_RNA_polymerase__YP_009351841__Otarine_picobirnavirus__1187973

Identity

Accession:
YP_009351841 ↗
Protein ID:
putative_RNA-dependent_RNA_polymerase
Kingdom:
euk

Quality

83.5 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Duplopiviricetes› Durnavirales› Picobirnaviridae› Orthopicobirnavirus› Otarine_picobirnavirus

TaxID: 1187973

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 417-530
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009389484__Picobirnavirus_dog_KNA_2015__1961162__D418-530
D2 medium residues 15-35_79-103_151-207_286-321
PDB
Domain cluster: rep: RNA-dependent_RNA-polymerase_-RdRp-__YP_004429254__Grapevine_Bulgarian_latent_virus__748667__D66-229_264-320
D3 medium residues 104-150_208-230_267-285
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fp4A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.53 38.0 2.86e-01 76.4% 97.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4431938 507.1.1.7 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › PF30523 0.51 30.0 2.34e-01 82.0% 24.4%
D4 medium residues 231-266_322-406
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181