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putative_RNA_dependent_RNA_polymerase
Euk-VirOurmia_melon_virus
putative_RNA_dependent_RNA_polymerase__YP_002019757__Ourmia_melon_virus__186786
Identity
- Accession:
- YP_002019757 ↗
- Protein ID:
- putative_RNA_dependent_RNA_polymerase
- Kingdom:
- euk
Quality
69.7
mean pLDDT
Taxonomy
Orthornavirae›
Lenarviricota›
Miaviricetes›
Ourlivirales›
Botourmiaviridae›
Ourmiavirus›
Ourmia_melon_virus
TaxID: 186786
Cluster
View cluster (39 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-193
D2
medium
residues 220-290_323-370_411-481
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pggA01 | 3.90.1730.10 | Alpha Beta › Alpha-Beta Complex › Infectious bursal virus vp1 polymerase fold › Infectious bursal virus vp1 polymerase domain | 0.67 | 62.0 | 5.05e-01 | 98.9% | 70.3% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 17.0 | 2.82e-01 | 82.1% | 70.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589612 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.67 | 57.0 | 4.67e-01 | 89.5% | 64.5% |
| 3784946 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.65 | 61.0 | 4.68e-01 | 100.0% | 58.6% |
| 4516798 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.65 | 55.0 | 4.08e-01 | 88.4% | 45.3% |
| 3615272 | 304.48.1.25 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RRM_4 | 0.64 | 57.0 | 4.48e-01 | 94.7% | 59.5% |
| 3792091 | 304.48.1.25 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RRM_4 | 0.64 | 57.0 | 4.59e-01 | 93.7% | 59.1% |
| 3960648 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.64 | 52.0 | 4.33e-01 | 83.7% | 65.2% |
| 3598902 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.64 | 56.0 | 4.41e-01 | 93.7% | 59.7% |
| 4361688 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.58 | 54.0 | 4.23e-01 | 98.9% | 60.3% |
| 4138932 | 304.48.1.72 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_N | 0.57 | 48.0 | 4.06e-01 | 88.4% | 68.7% |
| 3454701 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.56 | 44.0 | 3.84e-01 | 82.1% | 57.9% |
| 3586354 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 25.0 | 3.05e-01 | 82.1% | 63.3% |
| 3977489 | 377.1.1.117 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF27493 | 0.53 | 15.0 | 2.87e-01 | 72.1% | 88.0% |
D3
medium
residues 371-410_482-574
D4
medium
residues 578-680