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putative_S-phase-kinase-associated_protein_1

Euk-Vir

Aureococcus_anophagefferens_virus

putative_S-phase-kinase-associated_protein_1__YP_009052199__Aureococcus_anophagefferens_virus__1474867

Identity

Accession:
YP_009052199 ↗
Protein ID:
putative_S-phase-kinase-associated_protein_1
Kingdom:
euk

Quality

70.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Schizomimiviridae› Kratosvirus› Aureococcus_anophagefferens_virus

TaxID: 1474867

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-53
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4zs9A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 37.0 2.70e-01 75.5% 74.4%
3gr0D01 3.30.70.1780 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 27.0 3.04e-01 96.2% 58.5%
2bw2A01 3.10.20.420 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain 0.51 43.0 4.30e-01 96.2% 92.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3720246 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.65 44.0 3.07e-01 100.0% 20.5%
D2 medium residues 54-152
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6p7vD00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.73 60.0 5.50e-01 88.9% 67.5%
2r5sA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 39.0 4.13e-01 90.9% 78.4%
4nq0A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 46.0 3.45e-01 88.9% 53.5%
2xgsB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 36.0 4.11e-01 93.9% 90.4%
1hypA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.52 36.0 4.01e-01 90.9% 94.7%
3p0uA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.51 42.0 3.31e-01 89.9% 88.7%
1yuzB01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 40.0 3.60e-01 83.8% 94.9%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3594455 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.90 81.0 6.58e-01 92.9% 60.0%
3698529 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.90 76.0 6.50e-01 87.9% 64.8%
3224101 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.89 67.0 5.60e-01 92.9% 49.7%
3455807 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.88 67.0 5.89e-01 91.9% 57.0%
3326708 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.88 69.0 5.89e-01 92.9% 55.2%
3591550 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.88 78.0 6.69e-01 92.9% 73.1%
3677941 226.1.1.2 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1 0.86 67.0 5.78e-01 92.9% 55.2%
3032616 226.1.1.2 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1 0.85 60.0 6.22e-01 91.9% 76.6%
3211943 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.85 72.0 6.09e-01 92.9% 58.0%
3794322 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.83 68.0 5.78e-01 92.9% 56.0%
3218391 226.1.1.2 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1 0.83 64.0 6.92e-01 91.9% 94.1%
3384790 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.83 64.0 5.55e-01 91.9% 55.2%
3610868 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.83 61.0 6.28e-01 77.8% 80.0%
3610221 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.83 70.0 5.28e-01 88.9% 63.7%
3599838 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.82 72.0 5.47e-01 92.9% 54.9%
3241527 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.82 68.0 5.92e-01 92.9% 60.0%
3216203 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.82 68.0 5.76e-01 92.9% 56.1%
3220474 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.81 69.0 5.63e-01 92.9% 51.8%
3245317 226.1.1.5 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1_POZ 0.81 61.0 5.49e-01 90.9% 59.2%
3215222 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.80 69.0 5.86e-01 92.9% 60.0%
4018502 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.79 70.0 6.08e-01 92.9% 65.0%
3415579 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.79 70.0 6.01e-01 93.9% 63.4%
3999093 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.79 65.0 6.66e-01 88.9% 90.5%
3451070 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.78 64.0 5.64e-01 92.9% 60.7%
3400548 226.1.1.5 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1_POZ 0.78 68.0 5.97e-01 91.9% 65.7%
3708406 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.77 68.0 5.26e-01 92.9% 61.0%
3424242 226.1.1.2 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1 0.77 64.0 5.55e-01 92.9% 60.0%
3220120 226.1.1.2 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1 0.77 66.0 5.58e-01 93.9% 57.6%
3600417 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.76 69.0 5.63e-01 96.0% 68.6%
3663747 226.1.1.3 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.75 67.0 5.47e-01 92.9% 61.2%
3223028 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.70 60.0 5.20e-01 91.9% 91.0%
4011983 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.58 51.0 4.65e-01 93.9% 89.2%
3596878 109.40.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain 0.56 45.0 4.10e-01 96.0% 65.4%
3690505 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.55 41.0 3.66e-01 78.8% 82.9%
5046234 140.1.1.5 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 0.54 40.0 3.27e-01 78.8% 76.9%
3623710 3277.2.1.1 ↗ alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C 0.54 39.0 3.84e-01 75.8% 95.2%