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putative

Euk-Vir

Sonchus_yellow_net_nucleorhabdovirus

putative__NP_042283__Sonchus_yellow_net_nucleorhabdovirus__11307

Identity

Accession:
NP_042283 ↗
Protein ID:
putative
Kingdom:
euk

Quality

77.7 mean pLDDT

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-212
PDB
Domain cluster: rep: movement_protein__YP_009551569__Tea_plant_line_pattern_virus__2419940__D19-222
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.72 46.0 5.19e-01 77.9% 83.3%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 55.0 5.26e-01 78.9% 82.1%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 54.0 5.17e-01 78.9% 81.7%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 54.0 4.63e-01 78.9% 55.6%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 54.0 5.26e-01 78.9% 78.4%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 54.0 5.72e-01 78.9% 94.1%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 54.0 5.42e-01 78.9% 93.2%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 54.0 5.59e-01 78.9% 90.4%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 54.0 5.78e-01 78.9% 93.9%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 54.0 5.48e-01 78.9% 86.4%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 53.0 5.05e-01 78.9% 82.9%
1c8nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 53.0 5.06e-01 78.9% 81.3%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.69 47.0 5.24e-01 78.4% 87.2%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 52.0 4.99e-01 78.4% 80.2%
3jb8A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 52.0 5.29e-01 78.4% 92.4%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 52.0 5.19e-01 79.5% 84.1%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 52.0 4.75e-01 79.5% 67.2%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 51.0 5.25e-01 78.9% 81.4%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 50.0 5.08e-01 78.4% 78.3%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 51.0 4.43e-01 79.5% 64.7%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 51.0 4.87e-01 79.5% 69.7%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.66 50.0 5.26e-01 77.9% 97.1%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 50.0 4.83e-01 79.5% 71.9%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 50.0 4.72e-01 78.9% 79.2%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 50.0 4.35e-01 78.9% 73.2%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 50.0 4.92e-01 79.5% 77.2%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 49.0 4.29e-01 78.9% 67.4%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 4.50e-01 78.9% 74.0%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 4.46e-01 78.9% 74.0%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 5.28e-01 78.9% 93.2%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 48.0 4.61e-01 78.4% 75.7%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.63 46.0 4.62e-01 78.4% 73.7%
2q1mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 38.0 4.82e-01 77.9% 98.3%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 55.0 4.69e-01 93.2% 86.4%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 49.0 4.90e-01 79.5% 82.9%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 49.0 4.47e-01 78.9% 69.3%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 48.0 4.28e-01 78.9% 65.4%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 41.0 4.82e-01 79.5% 95.3%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 48.0 4.53e-01 78.9% 76.5%
8b38A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 48.0 4.52e-01 79.5% 91.6%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 48.0 4.27e-01 78.9% 76.9%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 52.0 4.52e-01 90.0% 96.6%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 47.0 4.39e-01 78.9% 74.9%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.61 43.0 4.95e-01 76.8% 99.3%
3gf6A00 2.60.120.750 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF3845 0.60 47.0 4.47e-01 80.5% 85.4%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 45.0 4.00e-01 78.4% 66.7%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 53.0 4.34e-01 97.9% 95.1%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 41.0 4.58e-01 77.9% 96.5%
2d73A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 33.0 4.07e-01 94.2% 93.8%
4b60A02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 39.0 4.29e-01 76.8% 85.9%
3iiiA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 43.0 4.39e-01 78.4% 96.1%
1pgw200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 51.0 4.15e-01 98.4% 94.0%
4xurA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 41.0 4.43e-01 76.8% 99.4%
1xjaB00 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.55 32.0 3.54e-01 89.5% 69.5%
4uzgA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 4.25e-01 74.7% 92.9%
2x9zA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 40.0 4.43e-01 90.0% 99.3%
1g43A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.53 39.0 4.19e-01 75.8% 91.9%
7ehgC01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 35.0 4.17e-01 83.7% 99.2%
1o59A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 40.0 4.15e-01 78.4% 88.1%
1uwwB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 42.0 4.33e-01 83.7% 92.7%
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 3.98e-01 76.3% 97.6%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 3.65e-01 77.9% 100.0%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 4.42e-01 86.8% 99.4%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 38.0 3.82e-01 78.9% 99.0%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3314257 10.32.1.193 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP 0.81 58.0 6.11e-01 82.1% 79.4%
3344591 10.2.1.81 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP 0.80 59.0 5.76e-01 83.7% 69.3%
3716837 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.74 43.0 5.10e-01 76.8% 83.1%
2797580 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.72 46.0 4.97e-01 77.9% 75.9%
3241410 10.32.1.218 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 0.71 42.0 5.40e-01 77.9% 100.0%
3742116 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.71 43.0 5.40e-01 76.8% 98.3%
1724852 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.71 54.0 5.83e-01 78.9% 94.6%
1234 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.71 54.0 5.47e-01 78.9% 92.7%
1233 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.71 54.0 5.49e-01 78.9% 91.5%
4627078 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.70 39.0 5.20e-01 73.7% 99.0%
146646 10.2.1.30 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 0.70 54.0 5.40e-01 78.9% 90.7%
328688 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.70 54.0 5.26e-01 78.9% 78.4%
4405706 10.32.1.243 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29992 0.70 41.0 5.14e-01 77.4% 92.5%
1693524 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.70 54.0 5.53e-01 78.9% 84.5%
2589532 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.70 54.0 5.36e-01 78.9% 90.7%
3591409 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.69 41.0 5.23e-01 82.1% 97.4%
3270665 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.69 44.0 5.36e-01 76.8% 96.8%
1232 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.68 52.0 5.23e-01 78.9% 93.4%
1866058 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.68 52.0 5.29e-01 78.4% 92.4%
5083968 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 44.0 5.29e-01 76.8% 99.2%
3893165 10.4.1.23 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 0.67 37.0 4.66e-01 76.8% 88.7%
3597600 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 44.0 5.14e-01 77.4% 92.6%
296002 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.67 50.0 5.09e-01 78.4% 78.3%
5039565 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 44.0 5.27e-01 76.8% 96.9%
2710690 10.2.1.29 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid 0.66 51.0 4.99e-01 78.9% 89.1%
3714782 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 46.0 5.25e-01 76.8% 93.1%
1400716 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.65 50.0 4.83e-01 79.5% 71.9%
2862065 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.65 50.0 5.22e-01 78.9% 85.7%
2526957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.65 50.0 4.31e-01 78.9% 62.8%
152483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.64 49.0 4.31e-01 78.9% 61.8%
2579092 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.64 49.0 4.40e-01 79.5% 77.2%
2793614 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.64 49.0 4.75e-01 78.9% 74.3%
4012587 10.32.1.232 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 0.64 47.0 4.91e-01 81.1% 82.9%
3611495 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 43.0 4.98e-01 77.4% 92.1%
4631095 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 45.0 5.06e-01 77.4% 91.3%
143450 10.2.1.37 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C 0.64 49.0 5.28e-01 78.9% 93.2%
1696117 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.64 48.0 4.96e-01 78.4% 85.3%
3606027 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 42.0 4.74e-01 77.4% 86.2%
1697855 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.63 49.0 4.47e-01 78.9% 69.3%
3821106 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 40.0 4.26e-01 82.6% 70.6%
4941983 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 44.0 5.08e-01 76.8% 97.1%
3522661 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.63 40.0 4.75e-01 78.4% 91.1%
4888111 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.62 48.0 4.84e-01 78.9% 83.1%
4900996 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.62 44.0 4.53e-01 73.2% 74.5%
5039342 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 38.0 4.23e-01 83.7% 77.9%
1866052 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.61 47.0 4.55e-01 78.9% 72.6%
3270626 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.61 40.0 4.82e-01 76.8% 100.0%
5033996 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 46.0 4.18e-01 77.9% 98.8%
4217288 10.3.1.0 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like 0.59 44.0 4.50e-01 75.3% 89.4%
4930825 10.48.1.0 ↗ beta sandwiches › jelly-roll › Camelysin metallo-endopeptidase-like › Camelysin metallo-endopeptidase-like 0.59 43.0 4.75e-01 96.8% 92.9%
3932049 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.58 40.0 4.16e-01 76.8% 75.4%
3416828 10.32.1.188 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM181_GOLD 0.58 42.0 4.73e-01 76.8% 98.6%
3867993 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.57 43.0 4.26e-01 77.9% 76.1%
5029611 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 42.0 4.34e-01 77.9% 100.0%
5005245 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 41.0 3.91e-01 76.3% 77.8%
3513335 10.1.1.83 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Menorin_C 0.56 42.0 4.01e-01 76.3% 99.1%
3168473 10.32.1.306 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 0.56 45.0 4.53e-01 83.7% 96.8%
5039229 10.1.2.184 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.55 42.0 4.29e-01 78.9% 95.1%
3906314 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.55 41.0 4.56e-01 77.9% 96.7%
3769357 10.1.1.69 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › CAND6-7_N 0.55 41.0 4.31e-01 77.4% 100.0%
4550201 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.54 42.0 3.38e-01 82.6% 51.6%
4243510 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.53 41.0 3.84e-01 81.1% 77.1%
5029875 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 42.0 4.27e-01 83.7% 98.4%
5021919 10.1.2.194 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like 0.52 39.0 4.11e-01 76.8% 95.3%
3823791 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.52 40.0 4.18e-01 81.1% 91.7%
3921479 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.52 39.0 3.77e-01 81.1% 67.7%
4270868 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.52 38.0 3.74e-01 77.9% 69.5%
4028426 11.2.1.101 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF29403 0.51 36.0 3.56e-01 70.5% 72.2%
5081899 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 33.0 3.70e-01 79.5% 82.8%
3235673 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 39.0 3.99e-01 79.5% 95.7%
3443454 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.51 39.0 3.65e-01 81.1% 96.4%
3457985 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.51 40.0 3.95e-01 83.7% 96.2%
3507415 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 38.0 3.82e-01 76.8% 85.3%
3667884 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.50 38.0 3.60e-01 77.4% 99.1%
3809848 10.32.1.199 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF642 0.50 40.0 4.24e-01 84.2% 97.6%
D2 high residues 216-290
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1on2A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.61 44.0 4.64e-01 80.0% 92.1%
1xjaB00 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.59 51.0 4.12e-01 100.0% 72.7%
4heoA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.59 38.0 4.18e-01 88.0% 89.1%
4gc5A02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.56 40.0 3.83e-01 77.3% 83.3%
2qffA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.55 42.0 4.23e-01 82.7% 85.1%
1or7B01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.54 42.0 3.94e-01 90.7% 67.0%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.54 38.0 4.18e-01 94.7% 100.0%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.52 40.0 3.73e-01 90.7% 65.6%
1lk3A00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 41.0 3.53e-01 93.3% 69.1%
1gvnA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.51 39.0 3.73e-01 82.7% 81.6%
3mkzN00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 43.0 3.87e-01 98.7% 93.6%
2ihyA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 37.0 2.65e-01 88.0% 23.8%
2oo2A00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.51 37.0 3.73e-01 78.7% 77.6%
3ed5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 38.0 3.68e-01 96.0% 73.8%
3cxbA03 1.10.1740.30 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain 0.50 39.0 3.87e-01 88.0% 80.2%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3851492 109.4.1.383 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI3K_1B_p101 0.66 58.0 4.00e-01 98.7% 70.4%
3965185 633.2.1.0 ↗ alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein 0.63 38.0 3.95e-01 89.3% 64.3%
4927356 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.63 37.0 3.28e-01 88.0% 41.0%
5031457 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.60 45.0 4.27e-01 81.3% 71.1%
3583393 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.60 42.0 4.42e-01 96.0% 84.6%
3996960 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 41.0 4.44e-01 96.0% 91.7%
4371240 632.7.1.55 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › DUF2605 0.57 40.0 3.68e-01 72.0% 88.4%
4365553 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.56 42.0 4.04e-01 82.7% 67.8%
4967913 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 42.0 4.10e-01 96.0% 71.8%
3942493 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 44.0 4.43e-01 96.0% 86.7%
4928413 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.56 42.0 4.07e-01 82.7% 76.5%
3506671 3938.1.1.1 ↗ alpha arrays › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain › hnRNP_Q_AcD 0.53 46.0 4.55e-01 100.0% 95.0%
5030379 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.53 48.0 4.51e-01 98.7% 88.9%
3177803 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.52 40.0 3.78e-01 88.0% 67.4%
3808173 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 38.0 3.88e-01 81.3% 84.0%
3455330 632.15.1.4 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 0.52 38.0 3.83e-01 80.0% 82.7%
3672278 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.52 40.0 3.69e-01 88.0% 64.0%
4471800 148.1.3.237 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30483 0.51 44.0 4.40e-01 94.7% 98.7%
3268426 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.51 41.0 4.07e-01 100.0% 85.0%
4020908 180.1.1.0 ↗ alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase 0.51 39.0 3.18e-01 86.7% 73.1%