←Back to structures
putative_ankyrin_repeat_protein
Euk-VirAcanthamoeba_polyphaga_mimivirus
putative_ankyrin_repeat_protein__YP_003986772__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986772 ↗
- Protein ID:
- putative_ankyrin_repeat_protein
- Kingdom:
- euk
Quality
71.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-121
Domain cluster:
rep: ankyrin_repeat_protein__YP_007354060__Acanthamoeba_polyphaga_moumouvirus__1269028__D6-109
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gs0A02 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.69 | 53.0 | 4.25e-01 | 80.9% | 73.5% |
| 2o0pA00 | 3.20.170.20 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Protein of unknown function DUF952 | 0.68 | 54.0 | 5.49e-01 | 85.2% | 100.0% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.53 | 29.0 | 2.86e-01 | 82.6% | 47.6% |
| 1nxzA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.51 | 31.0 | 3.78e-01 | 73.9% | 98.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 410936 | 237.1.1.5 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RolB_RolC | 0.62 | 48.0 | 4.10e-01 | 83.5% | 71.1% |
| 4319057 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.53 | 28.0 | 2.84e-01 | 82.6% | 48.7% |
| 4653564 | 6094.1.1.3 ↗ | a+b two layers › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › CurL-like_PKS_C | 0.53 | 38.0 | 3.87e-01 | 89.6% | 77.3% |
D2
high
residues 274-428
Domain cluster:
rep: putative_ankyrin_repeat_protein__YP_003987431__Acanthamoeba_polyphaga_mimivirus__212035__D178-320
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zgdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.77 | 44.0 | 5.55e-01 | 74.8% | 91.8% |
| 4uucA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.75 | 61.0 | 5.33e-01 | 96.1% | 58.8% |
| 5z2mB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.70 | 58.0 | 6.12e-01 | 99.4% | 96.4% |
| 5aarA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.67 | 51.0 | 4.83e-01 | 95.5% | 65.9% |
| 1qymA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.64 | 59.0 | 5.15e-01 | 97.4% | 72.6% |
| 3as5A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 47.0 | 4.47e-01 | 98.7% | 65.2% |
| 4besA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.64 | 51.0 | 5.47e-01 | 85.8% | 97.0% |
| 1k1aA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.63 | 58.0 | 5.06e-01 | 98.1% | 73.7% |
| 2qk1A01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.60 | 55.0 | 4.73e-01 | 100.0% | 84.5% |
| 1juqC00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 50.0 | 5.14e-01 | 94.8% | 94.6% |
| 4me2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 52.0 | 4.83e-01 | 98.7% | 77.8% |
| 2katA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 39.0 | 4.40e-01 | 91.6% | 91.3% |
| 3lpzA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 52.0 | 4.20e-01 | 100.0% | 88.7% |
| 3u4tB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 42.0 | 3.61e-01 | 98.1% | 46.3% |
| 5nnpE01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 45.0 | 3.22e-01 | 98.7% | 28.3% |
| 3ro3A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 44.0 | 4.41e-01 | 100.0% | 86.2% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 28.0 | 2.94e-01 | 75.5% | 53.0% |
| 3n71A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 46.0 | 4.14e-01 | 100.0% | 68.5% |
| 1elrA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 40.0 | 4.36e-01 | 97.4% | 97.7% |
| 2pziA04 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 39.0 | 3.75e-01 | 98.7% | 68.9% |
| 3kwoA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 29.0 | 2.96e-01 | 75.5% | 56.4% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 44.0 | 4.05e-01 | 96.1% | 84.3% |
| 4kf8B00 | 1.25.10.70 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.51 | 45.0 | 3.88e-01 | 100.0% | 88.4% |
| 3gw4A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 42.0 | 3.92e-01 | 96.8% | 71.9% |
| 2hr2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 44.0 | 4.45e-01 | 98.1% | 97.4% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4017980 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.82 | 62.0 | 5.92e-01 | 95.5% | 68.6% |
| 4572420 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.82 | 67.0 | 5.12e-01 | 98.1% | 40.6% |
| 3921991 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.80 | 55.0 | 5.50e-01 | 76.8% | 68.1% |
| 3370231 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.80 | 61.0 | 6.78e-01 | 96.8% | 98.4% |
| 3358122 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.75 | 64.0 | 6.71e-01 | 97.4% | 97.9% |
| 3255371 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.75 | 59.0 | 5.52e-01 | 98.1% | 67.6% |
| 4042478 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.75 | 57.0 | 3.85e-01 | 98.1% | 23.2% |
| 3276094 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.73 | 70.0 | 6.33e-01 | 100.0% | 79.0% |
| 3275803 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.70 | 63.0 | 4.50e-01 | 98.1% | 35.6% |
| 3453219 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.70 | 60.0 | 5.06e-01 | 97.4% | 57.5% |
| 3867041 | 109.3.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TRP_2 | 0.69 | 64.0 | 5.08e-01 | 97.4% | 54.5% |
| 3821282 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.69 | 64.0 | 4.57e-01 | 99.4% | 37.6% |
| 3896986 | 109.3.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TRP_2 | 0.68 | 64.0 | 5.08e-01 | 100.0% | 73.2% |
| 3722492 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.67 | 62.0 | 4.04e-01 | 98.7% | 30.2% |
| 3825686 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.67 | 51.0 | 4.23e-01 | 99.4% | 46.0% |
| 3820279 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.67 | 52.0 | 4.22e-01 | 100.0% | 44.2% |
| 3275448 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.67 | 52.0 | 4.68e-01 | 96.1% | 60.0% |
| 3334592 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 53.0 | 5.52e-01 | 99.4% | 92.1% |
| 3262169 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.66 | 53.0 | 5.21e-01 | 100.0% | 77.6% |
| 3254887 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.66 | 63.0 | 5.97e-01 | 100.0% | 87.1% |
| 3913903 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.66 | 62.0 | 4.51e-01 | 100.0% | 71.1% |
| 4011096 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.66 | 61.0 | 4.77e-01 | 98.1% | 51.3% |
| 3634172 | 109.3.1.164 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 | 0.65 | 60.0 | 4.48e-01 | 98.1% | 46.9% |
| 3668202 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.63 | 57.0 | 5.32e-01 | 97.4% | 83.2% |
| 3727990 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.63 | 58.0 | 4.99e-01 | 100.0% | 71.5% |
| 3859612 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 57.0 | 4.26e-01 | 97.4% | 51.5% |
| 3451217 | 109.4.1.1279 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 | 0.62 | 49.0 | 3.02e-01 | 99.4% | 13.3% |
| 3357017 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.62 | 44.0 | 3.40e-01 | 97.4% | 31.8% |
| 3817317 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.62 | 47.0 | 2.95e-01 | 97.4% | 14.0% |
| 3330055 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.62 | 46.0 | 3.83e-01 | 97.4% | 43.6% |
| 3325706 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.62 | 44.0 | 4.43e-01 | 95.5% | 70.6% |
| 3772018 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.61 | 57.0 | 5.47e-01 | 98.1% | 88.6% |
| 3314064 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.61 | 45.0 | 4.20e-01 | 95.5% | 61.1% |
| 3722746 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.61 | 49.0 | 5.02e-01 | 83.9% | 88.0% |
| 3363286 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.61 | 43.0 | 4.26e-01 | 96.8% | 68.5% |
| 3468899 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 43.0 | 4.21e-01 | 95.5% | 66.5% |
| 3671718 | 109.4.1.2659 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 | 0.60 | 43.0 | 2.86e-01 | 95.5% | 16.5% |
| 3449908 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 42.0 | 3.87e-01 | 92.9% | 55.0% |
| 3659378 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.59 | 48.0 | 3.95e-01 | 100.0% | 48.0% |
| 3657968 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.59 | 42.0 | 3.36e-01 | 97.4% | 35.6% |
| 3424646 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.59 | 42.0 | 3.38e-01 | 95.5% | 35.3% |
| 3770797 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.59 | 54.0 | 4.74e-01 | 100.0% | 89.1% |
| 3325707 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.59 | 42.0 | 3.53e-01 | 94.8% | 43.1% |
| 3683864 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.59 | 42.0 | 4.08e-01 | 97.4% | 66.5% |
| 3301231 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.59 | 44.0 | 3.23e-01 | 94.8% | 29.3% |
| 3428109 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.58 | 43.0 | 4.72e-01 | 98.1% | 98.3% |
| 3670028 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.58 | 42.0 | 4.41e-01 | 94.8% | 82.1% |
| 3653364 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.58 | 41.0 | 3.91e-01 | 94.8% | 58.9% |
| 3169483 | 109.4.1.903 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_28 | 0.58 | 52.0 | 3.79e-01 | 100.0% | 44.6% |
| 3321887 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.58 | 41.0 | 3.59e-01 | 95.5% | 47.1% |
| 3825808 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.57 | 43.0 | 3.30e-01 | 97.4% | 32.8% |
| 3347276 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.56 | 40.0 | 4.35e-01 | 96.8% | 87.7% |
| 3359746 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 44.0 | 2.73e-01 | 97.4% | 13.8% |
| 3307230 | 109.46.1.9 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › WD40 | 0.56 | 34.0 | 2.42e-01 | 87.1% | 19.5% |
| 4174064 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 36.0 | 4.08e-01 | 99.4% | 89.6% |
| 3367290 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.54 | 48.0 | 3.42e-01 | 99.4% | 32.0% |
| 3579643 | 109.7.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › TRAPPC9-Trs120 | 0.53 | 33.0 | 3.73e-01 | 80.6% | 81.7% |
| 3461303 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.53 | 45.0 | 4.51e-01 | 90.3% | 100.0% |
| 3318083 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.51 | 44.0 | 3.72e-01 | 96.1% | 61.1% |
| 3496785 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 44.0 | 3.58e-01 | 96.1% | 53.8% |
| 5047702 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 45.0 | 3.92e-01 | 100.0% | 68.6% |
| 3637884 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 44.0 | 3.36e-01 | 98.7% | 47.6% |
D3
medium
residues 125-179
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c2gA02 | 1.10.10.1630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sys-1 C-terminal domain-like | 0.69 | 58.0 | 5.44e-01 | 94.5% | 92.6% |
| 3ehrA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 59.0 | 4.69e-01 | 100.0% | 53.4% |
| 3l9tA01 | 1.10.1240.70 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.59 | 47.0 | 4.18e-01 | 92.7% | 60.2% |
| 6bs3B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 2.66e-01 | 100.0% | 57.6% |
| 3l8nA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.51 | 41.0 | 3.85e-01 | 100.0% | 86.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3364253 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.54 | 45.0 | 3.08e-01 | 100.0% | 26.7% |
| 4085720 | 208.1.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Acetyltransf_11 | 0.52 | 37.0 | 2.47e-01 | 78.2% | 33.6% |
D4
medium
residues 183-269