←Back to structures

putative_ankyrin_repeat_protein

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

putative_ankyrin_repeat_protein__YP_003987305__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003987305 ↗
Protein ID:
putative_ankyrin_repeat_protein
Kingdom:
euk

Quality

83.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 511-629
PDB
Domain cluster: rep: putative_ankyrin_repeat_protein__YP_003987298__Acanthamoeba_polyphaga_mimivirus__212035__D536-626
D2 medium residues 15-85
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w1kA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.53 46.0 3.38e-01 100.0% 83.2%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 3.30e-01 91.5% 62.8%
2nr4A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.40e-01 91.5% 70.7%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3704303 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 42.0 3.39e-01 88.7% 74.7%
3232689 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.53 37.0 3.38e-01 74.6% 85.3%
3260574 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 37.0 3.17e-01 74.6% 81.8%
3201540 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 2.71e-01 76.1% 38.9%
4051662 304.55.2.7 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f 0.51 35.0 2.52e-01 71.8% 96.4%
4255066 304.20.1.5 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f 0.51 35.0 2.49e-01 71.8% 92.3%
4986730 1.1.9.23 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.51 35.0 2.97e-01 71.8% 99.2%
3243030 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.50 36.0 3.28e-01 77.5% 86.0%
D3 medium residues 442-510
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fflA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 59.0 4.80e-01 76.8% 57.9%
3mkqA03 1.25.40.470 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 50.0 3.62e-01 100.0% 29.2%
2pqrA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 56.0 5.08e-01 100.0% 83.9%
3feyA02 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 54.0 4.00e-01 100.0% 58.9%
5y27A00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.60 31.0 2.76e-01 78.3% 34.7%
2yx0A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 46.0 3.00e-01 95.7% 59.6%
6ulwA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.54 45.0 2.93e-01 100.0% 85.0%
1vquA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.54 38.0 3.91e-01 78.3% 86.6%
3vylA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 45.0 3.08e-01 100.0% 54.9%
2bbwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 40.0 2.90e-01 85.5% 79.5%
2kj8A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.51 36.0 3.14e-01 78.3% 58.5%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3995795 109.4.1.2568 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, SRP_TPR_like 0.72 56.0 3.78e-01 85.5% 28.9%
3668286 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.68 46.0 4.61e-01 71.0% 92.9%
3268533 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 58.0 3.86e-01 100.0% 24.0%
3526552 148.1.1.4 ↗ alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF 0.65 33.0 2.87e-01 78.3% 34.0%
3564283 109.4.1.570 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps8 0.63 53.0 3.08e-01 100.0% 11.6%
1688094 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 47.0 4.86e-01 87.0% 89.1%
3381535 109.4.1.958 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Vps41 0.61 51.0 3.18e-01 97.1% 23.4%
3213536 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.61 45.0 3.68e-01 87.0% 41.5%
3309357 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 45.0 3.38e-01 100.0% 45.0%
5019916 223.1.1.62 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PocR 0.54 37.0 2.75e-01 81.2% 26.3%