←Back to structures
putative_bifunctional_polynucleotide_phosphatase_kinase
Euk-VirAcanthamoeba_polyphaga_mimivirus
putative_bifunctional_polynucleotide_phosphatase_kinase__YP_003986976__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986976 ↗
- Protein ID:
- putative_bifunctional_polynucleotide_phosphatase_kinase
- Kingdom:
- euk
Quality
72.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 259-415
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_30120_prodigal-single.1__X__X__00032__D47-218
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13671.13 best | AAA_33 | 29.1 | 1.60e-06 | 28.7% | 25.2% |
D2
medium
residues 18-44_64-142
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08645.18 best | PNK3P | 56.8 | 3.30e-15 | 93.4% | 49.1% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u1vA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.66 | 49.0 | 3.87e-01 | 78.3% | 60.5% |
| 6zb8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 49.0 | 3.39e-01 | 80.2% | 54.4% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 48.0 | 4.48e-01 | 80.2% | 73.5% |
| 3cisH00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 47.0 | 3.48e-01 | 78.3% | 33.7% |
| 4u3aB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 49.0 | 3.57e-01 | 85.8% | 66.7% |
| 4w7wA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 46.0 | 3.31e-01 | 80.2% | 64.9% |
| 2ielA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 45.0 | 4.18e-01 | 77.4% | 68.2% |
| 6d9yA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 45.0 | 3.50e-01 | 81.1% | 86.5% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.60 | 44.0 | 3.01e-01 | 77.4% | 87.9% |
| 3milB00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 44.0 | 3.45e-01 | 79.2% | 67.6% |
| 6acsA00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.59 | 44.0 | 3.50e-01 | 79.2% | 78.7% |
| 3ip3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 41.0 | 3.35e-01 | 72.6% | 58.1% |
| 4p02A02 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 44.0 | 3.41e-01 | 80.2% | 39.3% |
| 1uanA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.58 | 43.0 | 3.40e-01 | 78.3% | 60.0% |
| 4zohA02 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.58 | 46.0 | 4.30e-01 | 85.8% | 79.7% |
| 3oonA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.57 | 40.0 | 3.97e-01 | 72.6% | 80.5% |
| 3lf2A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 42.0 | 3.27e-01 | 78.3% | 81.1% |
| 2x7iA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 32.0 | 2.73e-01 | 71.7% | 34.1% |
| 5f7uA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 45.0 | 3.15e-01 | 87.7% | 73.5% |
| 3h8lA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 40.0 | 3.59e-01 | 74.5% | 84.8% |
| 1g7uA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 43.0 | 3.26e-01 | 84.9% | 69.7% |
| 3ewiB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 42.0 | 3.62e-01 | 78.3% | 67.7% |
| 2r60A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 44.0 | 3.59e-01 | 89.6% | 47.4% |
| 4wpgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 41.0 | 3.36e-01 | 81.1% | 83.3% |
| 3aptA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.54 | 42.0 | 3.12e-01 | 84.9% | 76.7% |
| 4ry9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 38.0 | 3.32e-01 | 74.5% | 48.8% |
| 2gs8A01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.53 | 31.0 | 2.62e-01 | 70.8% | 33.5% |
| 3w42A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 44.0 | 3.55e-01 | 89.6% | 100.0% |
| 7wj9A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 40.0 | 2.95e-01 | 82.1% | 64.7% |
| 1kjqA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 34.0 | 3.28e-01 | 83.0% | 56.2% |
| 2gs3A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 44.0 | 3.80e-01 | 99.1% | 58.5% |
| 3qvoA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 39.0 | 3.17e-01 | 78.3% | 69.9% |
| 3m1rB01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.52 | 39.0 | 2.88e-01 | 80.2% | 76.5% |
| 3lqkA00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.52 | 39.0 | 3.24e-01 | 80.2% | 58.8% |
| 5facA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.52 | 44.0 | 3.54e-01 | 96.2% | 95.0% |
| 4qhrA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.51 | 42.0 | 3.45e-01 | 91.5% | 92.3% |
| 3tz6A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 35.0 | 2.89e-01 | 70.8% | 66.2% |
| 3iibA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.50 | 45.0 | 3.31e-01 | 100.0% | 36.6% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3696327 | 2006.1.1.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P | 0.84 | 78.0 | 5.90e-01 | 97.2% | 60.0% |
| 3782392 | 2006.1.1.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P | 0.84 | 79.0 | 6.13e-01 | 100.0% | 72.4% |
| 4014255 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.81 | 77.0 | 5.81e-01 | 99.1% | 66.2% |
| 3609366 | 2006.1.1.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P | 0.81 | 77.0 | 5.62e-01 | 100.0% | 54.5% |
| 3687416 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.75 | 68.0 | 5.47e-01 | 100.0% | 71.2% |
| 3714488 | 2006.1.1.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PNK3P | 0.75 | 70.0 | 5.44e-01 | 100.0% | 68.5% |
| 3192385 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.72 | 65.0 | 5.35e-01 | 100.0% | 69.2% |
| 3597555 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.72 | 66.0 | 5.11e-01 | 100.0% | 72.6% |
| 3176317 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.72 | 65.0 | 5.33e-01 | 100.0% | 65.1% |
| 3188513 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.71 | 64.0 | 5.36e-01 | 100.0% | 69.2% |
| 3787802 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.64 | 56.0 | 4.14e-01 | 98.1% | 44.0% |
| 4954578 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.64 | 47.0 | 4.33e-01 | 78.3% | 65.0% |
| 3438965 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 47.0 | 4.80e-01 | 77.4% | 90.0% |
| 3452376 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.62 | 46.0 | 4.20e-01 | 78.3% | 66.0% |
| 9860 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.61 | 45.0 | 4.18e-01 | 77.4% | 68.2% |
| 4963967 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.61 | 47.0 | 3.88e-01 | 83.0% | 95.9% |
| 4274452 | 2002.1.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM | 0.60 | 46.0 | 3.59e-01 | 82.1% | 80.3% |
| 4959820 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.60 | 44.0 | 4.05e-01 | 77.4% | 64.3% |
| 3175178 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.60 | 52.0 | 3.97e-01 | 96.2% | 45.1% |
| 3659822 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.60 | 45.0 | 4.32e-01 | 80.2% | 76.0% |
| 3613287 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 44.0 | 3.86e-01 | 78.3% | 60.0% |
| 5012913 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.59 | 43.0 | 3.54e-01 | 77.4% | 86.3% |
| 4604367 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.58 | 43.0 | 4.06e-01 | 80.2% | 68.9% |
| 5048246 | 2002.3.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_38N | 0.58 | 43.0 | 3.28e-01 | 79.2% | 64.5% |
| 4372569 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.58 | 50.0 | 3.38e-01 | 100.0% | 91.5% |
| 4346434 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.58 | 43.0 | 3.97e-01 | 79.2% | 97.8% |
| 3949778 | 2007.1.6.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Bac_GDH_CD | 0.57 | 44.0 | 3.60e-01 | 100.0% | 45.1% |
| 4936416 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.57 | 42.0 | 3.25e-01 | 79.2% | 92.2% |
| 5056877 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.57 | 49.0 | 3.36e-01 | 98.1% | 94.6% |
| 4031778 | 7561.1.1.1 ↗ | a/b three-layered sandwiches › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase | 0.56 | 40.0 | 3.43e-01 | 75.5% | 75.0% |
| 4564000 | 3273.1.1.7 ↗ | alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › GDH_HM3 | 0.56 | 44.0 | 3.14e-01 | 100.0% | 29.2% |
| 4539530 | 2007.1.6.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Bac_GDH_CD | 0.55 | 42.0 | 3.53e-01 | 100.0% | 46.5% |
| 1262726 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.55 | 44.0 | 3.62e-01 | 89.6% | 48.8% |
| 3261687 | 2002.1.1.346 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MS_TIM-barrel, MS_C | 0.54 | 47.0 | 3.04e-01 | 96.2% | 70.4% |
| 4029053 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.54 | 49.0 | 3.59e-01 | 100.0% | 47.7% |
| 5072006 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.54 | 43.0 | 3.52e-01 | 88.7% | 46.7% |
| 4384998 | 2003.1.5.50 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TylF | 0.54 | 40.0 | 3.06e-01 | 78.3% | 49.4% |
| 3365939 | 7512.1.1.63 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1+GT-B_Sucrose_synth | 0.53 | 45.0 | 3.58e-01 | 99.1% | 43.9% |
| 4985479 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.53 | 38.0 | 3.50e-01 | 74.5% | 74.1% |
| 4957804 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 39.0 | 3.27e-01 | 87.7% | 46.2% |
D3
medium
residues 45-63_143-172_193-222
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08645.18 best | PNK3P | 46.2 | 6.00e-12 | 79.8% | 41.0% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hwwB00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.61 | 54.0 | 4.26e-01 | 97.5% | 94.3% |
| 4gicA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.58 | 42.0 | 3.04e-01 | 75.9% | 46.6% |
| 2yfqB03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 37.0 | 3.13e-01 | 70.9% | 42.9% |
| 1xmxA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 43.0 | 3.56e-01 | 100.0% | 47.0% |
| 1ps9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 46.0 | 3.86e-01 | 100.0% | 94.5% |
| 3lk7A03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.53 | 40.0 | 3.34e-01 | 96.2% | 47.0% |
| 3lp8A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 37.0 | 3.51e-01 | 97.5% | 62.0% |
| 2xggB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.52 | 42.0 | 3.52e-01 | 92.4% | 94.6% |
| 6zpkA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.52 | 44.0 | 4.35e-01 | 100.0% | 87.2% |
| 1jkxA00 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.51 | 44.0 | 3.21e-01 | 100.0% | 35.4% |
| 5cjjB00 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.51 | 43.0 | 3.29e-01 | 96.2% | 38.9% |
| 6rqaA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 37.0 | 2.96e-01 | 96.2% | 35.9% |
| 5c3uA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 38.0 | 3.57e-01 | 96.2% | 65.6% |
| 3ip3A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 36.0 | 3.20e-01 | 96.2% | 49.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969587 | 2008.1.1.108 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 | 0.58 | 46.0 | 4.00e-01 | 100.0% | 54.6% |
| 4481335 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.56 | 39.0 | 3.02e-01 | 73.4% | 52.8% |
| 3247604 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 40.0 | 3.11e-01 | 100.0% | 33.5% |
| 4953911 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.55 | 42.0 | 3.81e-01 | 98.7% | 58.3% |
| 4949256 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.54 | 42.0 | 3.08e-01 | 100.0% | 30.5% |
| 3646297 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 41.0 | 3.12e-01 | 88.6% | 81.4% |
| 3386890 | 2484.1.1.94 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C_2 | 0.52 | 45.0 | 3.32e-01 | 100.0% | 98.3% |
| 4977513 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.52 | 44.0 | 3.63e-01 | 97.5% | 54.8% |
| 3300045 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 42.0 | 3.38e-01 | 100.0% | 43.0% |
| 3897282 | 7568.1.1.4 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 | 0.52 | 42.0 | 4.11e-01 | 100.0% | 82.4% |
| 3201743 | 2007.6.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › Ribosomal_S2 | 0.52 | 43.0 | 3.23e-01 | 100.0% | 49.8% |
| 3314116 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.52 | 43.0 | 4.17e-01 | 100.0% | 81.1% |
| 3456976 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.52 | 43.0 | 4.17e-01 | 100.0% | 81.1% |
| 4520163 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.51 | 42.0 | 4.11e-01 | 98.7% | 81.8% |
| 4184616 | 7516.1.1.92 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › RgpF | 0.51 | 42.0 | 3.02e-01 | 100.0% | 29.6% |
| 2440205 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 42.0 | 3.17e-01 | 97.5% | 84.0% |
| 4278316 | 2003.1.8.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N | 0.51 | 43.0 | 4.12e-01 | 96.2% | 96.8% |
| 4460512 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.50 | 40.0 | 4.05e-01 | 97.5% | 86.3% |
| 3737497 | 7516.1.1.6 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 | 0.50 | 44.0 | 3.01e-01 | 100.0% | 34.0% |