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putative_capsid_maturation_protease
Euk-VirCyprinid_herpesvirus_1
putative_capsid_maturation_protease__YP_007003741__Cyprinid_herpesvirus_1__317858
Identity
- Accession:
- YP_007003741 ↗
- Protein ID:
- putative_capsid_maturation_protease
- Kingdom:
- euk
Quality
52.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_1
TaxID: 317858
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 63-253
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25720.2 best | Herpes_ORF28 | 194.4 | 2.60e-57 | 99.0% | 83.7% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nzcB00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.67 | 30.0 | 4.48e-01 | 72.8% | 97.5% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 33.0 | 4.62e-01 | 73.3% | 100.0% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 34.0 | 4.69e-01 | 79.1% | 98.9% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 29.0 | 4.30e-01 | 71.7% | 100.0% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 30.0 | 4.37e-01 | 72.3% | 100.0% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 30.0 | 4.37e-01 | 72.3% | 100.0% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 30.0 | 4.22e-01 | 78.0% | 94.4% |
| 4nasB01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.61 | 36.0 | 4.61e-01 | 71.7% | 100.0% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.60 | 33.0 | 4.25e-01 | 71.2% | 92.0% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 32.0 | 4.29e-01 | 74.9% | 100.0% |
| 4zosB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 31.0 | 4.18e-01 | 74.3% | 100.0% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 31.0 | 4.16e-01 | 74.3% | 99.0% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 27.0 | 3.72e-01 | 72.3% | 87.4% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.57 | 21.0 | 3.61e-01 | 70.7% | 95.6% |
| 3kkfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 32.0 | 4.17e-01 | 75.9% | 98.1% |
| 2bbeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 30.0 | 3.98e-01 | 74.9% | 95.1% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 31.0 | 4.04e-01 | 73.8% | 99.0% |
| 4ofyD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 26.0 | 3.44e-01 | 70.7% | 82.3% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 30.0 | 3.98e-01 | 74.3% | 99.0% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.55 | 39.0 | 4.44e-01 | 72.3% | 100.0% |
| 2ednA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 29.0 | 3.53e-01 | 70.7% | 78.8% |
| 8ediA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 28.0 | 3.61e-01 | 70.7% | 87.5% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.53 | 36.0 | 4.12e-01 | 77.5% | 91.6% |
| 1txkB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 30.0 | 3.67e-01 | 74.9% | 87.8% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.53 | 31.0 | 3.92e-01 | 74.9% | 96.5% |
| 5z0uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 29.0 | 3.44e-01 | 71.2% | 78.2% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 23.0 | 3.27e-01 | 79.6% | 87.4% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 30.0 | 3.54e-01 | 100.0% | 83.2% |
| 3d3yA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 36.0 | 3.61e-01 | 70.2% | 91.1% |
| 3eoqB02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 35.0 | 3.66e-01 | 71.2% | 95.6% |
| 3amiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 36.0 | 3.63e-01 | 73.3% | 92.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4226508 | 304.12.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C | 0.67 | 32.0 | 4.65e-01 | 72.3% | 100.0% |
| 4986088 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 34.0 | 4.70e-01 | 72.3% | 97.9% |
| 4502129 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.67 | 36.0 | 4.87e-01 | 87.4% | 100.0% |
| 4006594 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.66 | 30.0 | 4.46e-01 | 77.0% | 97.6% |
| 3970813 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.66 | 33.0 | 4.58e-01 | 74.9% | 96.8% |
| 139586 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 31.0 | 4.47e-01 | 72.3% | 100.0% |
| 3355161 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 32.0 | 4.38e-01 | 72.3% | 92.6% |
| 3604174 | 304.8.1.96 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 | 0.65 | 30.0 | 4.34e-01 | 72.3% | 96.5% |
| 3804539 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 32.0 | 4.16e-01 | 79.1% | 83.6% |
| 3283466 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.62 | 34.0 | 3.91e-01 | 85.9% | 70.3% |
| 4965450 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.60 | 35.0 | 4.48e-01 | 70.7% | 98.2% |
| 5001345 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 32.0 | 2.73e-01 | 70.2% | 31.6% |
| 3610986 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 35.0 | 3.63e-01 | 79.6% | 64.9% |
| 4312381 | 11.1.1.873 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_CNNM4_N | 0.56 | 33.0 | 3.84e-01 | 70.7% | 80.7% |
| 2989469 | 11.1.1.847 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Unc5_NetrinR_N | 0.55 | 28.0 | 3.60e-01 | 71.2% | 83.2% |
| 5010338 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 33.0 | 4.18e-01 | 75.9% | 99.1% |
| 3471366 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 28.0 | 3.29e-01 | 71.2% | 76.8% |
| 3734699 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.50 | 34.0 | 3.76e-01 | 85.3% | 86.0% |
D2
medium
residues 274-332