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putative_capsid_protein_1
Euk-VirSkunk_amdoparvovirus
putative_capsid_protein_1__YP_009361880__Skunk_amdoparvovirus__1961072
Identity
- Accession:
- YP_009361880 ↗
- Protein ID:
- putative_capsid_protein_1
- Kingdom:
- euk
Quality
48.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Amdoparvovirus›
Skunk_amdoparvovirus
TaxID: 1961072
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 75-114_135-191_235-258_293-327_611-635
Domain cluster:
rep: capsid_protein_2__YP_009272916__Mink_bocavirus_1__2259808__D75-100_121-246
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 110.7 | 1.00e-31 | 53.6% | 20.9% |
D2
medium
residues 208-234_270-292_561-593