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putative_capsid_protein_2
Euk-VirSkunk_amdoparvovirus
putative_capsid_protein_2__YP_009361881__Skunk_amdoparvovirus__1961072
Identity
- Accession:
- YP_009361881 ↗
- Protein ID:
- putative_capsid_protein_2
- Kingdom:
- euk
Quality
50.9
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Amdoparvovirus›
Skunk_amdoparvovirus
TaxID: 1961072
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-67_104-206_250-289_507-583
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 158.9 | 2.50e-46 | 42.5% | 18.7% |
| PF00740.24 | VP1_2 | 74.4 | 1.00e-20 | 30.6% | 12.0% |
| PF00740.24 | VP1_2 | 29.8 | 3.30e-07 | 18.6% | 10.3% |
D2
medium
residues 68-103_207-249