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putative_capsid_protein

Euk-Vir

Astrovirus_VA4

putative_capsid_protein__YP_006905857__Astrovirus_VA4__1247113

Identity

Accession:
YP_006905857 ↗
Protein ID:
putative_capsid_protein
Kingdom:
euk

Quality

71.2 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Stellavirales› Astroviridae› Astrovirus_VA4

TaxID: 1247113

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 73-257
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03115.21 best Astro_capsid_N 182.1 1.70e-53 96.2% 72.3%
D2 high residues 261-389
PDB
Domain cluster: rep: capsid_protein__NP_056788__Hepeviridae__291484__D322-442
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20751.3 best SP2_M 33.8 4.90e-08 98.5% 71.6%
D3 high residues 432-550_595-665
PDB
Domain cluster: rep: capsid_protein_precursor__YP_003090288__Astrovirus_VA1__645687__D417-576_607-679