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putative_capsid_protein
Euk-VirPhytophthora_parasitica_virus_Viruses.
putative_capsid_protein__YP_009142781__Phytophthora_parasitica_virus_Viruses.__X
Identity
- Accession:
- YP_009142781 ↗
- Protein ID:
- putative_capsid_protein
- Kingdom:
- euk
Quality
68.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 168-309_329-426
Domain cluster:
rep: hypothetical_protein_2__YP_009337275__Changjiang_tombus-like_virus_14__1922807__D50-279
CATH (74)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3isrA02 | 2.60.40.2250 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.77 | 27.0 | 4.29e-01 | 95.4% | 78.0% |
| 4nwvA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 50.0 | 5.66e-01 | 99.2% | 88.6% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 48.0 | 5.70e-01 | 98.8% | 95.7% |
| 3zxaC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 48.0 | 5.38e-01 | 99.6% | 84.1% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 49.0 | 5.83e-01 | 98.3% | 98.8% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 46.0 | 5.25e-01 | 98.3% | 83.6% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 49.0 | 4.58e-01 | 98.3% | 57.3% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 49.0 | 5.63e-01 | 98.3% | 92.7% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 49.0 | 5.38e-01 | 99.6% | 82.7% |
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.71 | 44.0 | 4.89e-01 | 96.7% | 76.3% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 48.0 | 5.08e-01 | 99.6% | 74.8% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 48.0 | 5.66e-01 | 97.9% | 96.4% |
| 2ws9201 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 50.0 | 5.51e-01 | 97.9% | 88.2% |
| 2ztnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 52.0 | 5.76e-01 | 98.8% | 94.7% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 50.0 | 5.65e-01 | 98.8% | 94.6% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 50.0 | 5.31e-01 | 99.2% | 82.0% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.68 | 37.0 | 4.60e-01 | 96.2% | 85.4% |
| 4d7yA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 37.0 | 5.01e-01 | 96.2% | 99.2% |
| 5ewnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 50.0 | 5.67e-01 | 98.3% | 98.4% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 49.0 | 5.62e-01 | 97.9% | 98.9% |
| 1c8nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 50.0 | 5.26e-01 | 99.2% | 83.1% |
| 1o91A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 38.0 | 4.99e-01 | 96.2% | 100.0% |
| 1f2nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 48.0 | 5.16e-01 | 98.8% | 83.5% |
| 1wcdJ01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 54.0 | 5.14e-01 | 100.0% | 72.2% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 37.0 | 4.88e-01 | 93.8% | 100.0% |
| 5jzgA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 45.0 | 4.70e-01 | 98.8% | 73.9% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 50.0 | 5.18e-01 | 98.8% | 84.2% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 47.0 | 4.93e-01 | 99.2% | 79.7% |
| 1ng0C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 49.0 | 5.15e-01 | 99.2% | 84.9% |
| 1rj8A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 38.0 | 4.89e-01 | 95.8% | 98.6% |
| 4rs5A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 48.0 | 5.02e-01 | 98.3% | 82.4% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 47.0 | 4.87e-01 | 98.3% | 79.2% |
| 1pgw200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 46.0 | 4.04e-01 | 98.3% | 49.9% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 46.0 | 4.77e-01 | 98.3% | 79.1% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 51.0 | 4.95e-01 | 99.2% | 76.5% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.62 | 26.0 | 3.65e-01 | 95.4% | 77.6% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 44.0 | 4.40e-01 | 98.3% | 71.4% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 46.0 | 4.65e-01 | 98.3% | 77.4% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 46.0 | 4.69e-01 | 98.3% | 78.7% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 4.72e-01 | 97.9% | 76.8% |
| 1kxgA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 37.0 | 4.67e-01 | 95.8% | 99.3% |
| 6eiwA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 5.20e-01 | 97.5% | 100.0% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 32.0 | 4.39e-01 | 95.0% | 98.4% |
| 5c8cB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 48.0 | 4.51e-01 | 98.3% | 68.5% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 48.0 | 4.65e-01 | 98.3% | 75.0% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 46.0 | 4.64e-01 | 97.9% | 79.0% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 47.0 | 4.48e-01 | 98.3% | 69.5% |
| 3cjiA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 52.0 | 5.06e-01 | 98.8% | 84.9% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 46.0 | 4.59e-01 | 98.3% | 78.1% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 4.93e-01 | 98.3% | 80.3% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 49.0 | 4.67e-01 | 98.8% | 75.7% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 48.0 | 4.78e-01 | 99.2% | 81.2% |
| 3a21A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 27.0 | 3.80e-01 | 95.4% | 95.0% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 55.0 | 5.00e-01 | 100.0% | 77.5% |
| 3nqhA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 33.0 | 4.28e-01 | 93.8% | 97.1% |
| 5fuiA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 31.0 | 4.19e-01 | 93.8% | 100.0% |
| 1w0nA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 30.0 | 4.13e-01 | 93.8% | 100.0% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 53.0 | 4.87e-01 | 100.0% | 76.7% |
| 3napA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 42.0 | 4.13e-01 | 98.3% | 69.3% |
| 1b35A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 46.0 | 4.54e-01 | 98.3% | 79.2% |
| 6ovbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 33.0 | 4.05e-01 | 95.4% | 89.0% |
| 2wraA00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.56 | 29.0 | 4.11e-01 | 93.8% | 100.0% |
| 2okxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 32.0 | 3.59e-01 | 90.8% | 70.5% |
| 5x7qA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 31.0 | 4.04e-01 | 93.3% | 100.0% |
| 5f7uA06 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 30.0 | 3.99e-01 | 93.3% | 99.2% |
| 3wnoA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 30.0 | 3.99e-01 | 93.8% | 98.5% |
| 7bysA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 29.0 | 3.85e-01 | 92.9% | 100.0% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 32.0 | 3.98e-01 | 94.2% | 97.9% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 35.0 | 4.21e-01 | 95.4% | 97.6% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 35.0 | 3.89e-01 | 95.0% | 82.7% |
| 2c9kA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 32.0 | 3.80e-01 | 95.4% | 87.8% |
| 2zxqA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 34.0 | 4.06e-01 | 93.8% | 97.5% |
| 3ks7A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 37.0 | 4.28e-01 | 95.8% | 100.0% |
| 1cd3F00 | 2.60.169.10 | Mainly Beta › Sandwich › Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1 › Microviridae F protein | 0.50 | 47.0 | 3.84e-01 | 100.0% | 97.2% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4000176 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.80 | 26.0 | 4.11e-01 | 94.6% | 70.5% |
| 1693522 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.73 | 50.0 | 5.64e-01 | 98.8% | 88.1% |
| 3344591 | 10.2.1.81 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP | 0.73 | 43.0 | 4.69e-01 | 97.1% | 68.8% |
| 1724852 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.72 | 49.0 | 5.82e-01 | 98.3% | 98.2% |
| 4814721 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.72 | 49.0 | 5.34e-01 | 99.2% | 81.7% |
| 31171 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.72 | 46.0 | 5.19e-01 | 98.3% | 82.4% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.71 | 50.0 | 5.38e-01 | 99.2% | 81.8% |
| 2542980 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.71 | 48.0 | 5.36e-01 | 97.9% | 85.3% |
| 1867996 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.71 | 50.0 | 4.83e-01 | 99.2% | 64.6% |
| 4202051 | 10.32.1.271 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27237 | 0.70 | 29.0 | 4.63e-01 | 87.9% | 100.0% |
| 5005599 | 10.1.2.201 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PF27237 | 0.70 | 29.0 | 4.63e-01 | 87.9% | 100.0% |
| 1866058 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.70 | 50.0 | 5.65e-01 | 98.8% | 94.6% |
| 3314257 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.69 | 41.0 | 4.78e-01 | 97.5% | 80.0% |
| 1444532 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.69 | 50.0 | 5.31e-01 | 99.2% | 82.0% |
| 3461676 | 10.32.1.212 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GUB_WAK_bind | 0.69 | 39.0 | 4.30e-01 | 97.1% | 67.0% |
| 2441244 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.68 | 50.0 | 5.21e-01 | 98.8% | 80.9% |
| 2579093 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.68 | 48.0 | 4.97e-01 | 98.8% | 75.3% |
| 3537016 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.68 | 36.0 | 4.92e-01 | 95.4% | 99.2% |
| 2117349 | 10.2.1.10 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cucumo_coat | 0.67 | 43.0 | 4.77e-01 | 99.6% | 79.1% |
| 1409656 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.67 | 50.0 | 5.26e-01 | 99.2% | 83.1% |
| 3612751 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 38.0 | 4.97e-01 | 95.4% | 95.7% |
| 2589532 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.67 | 49.0 | 5.44e-01 | 98.3% | 92.3% |
| 1877512 | 10.2.1.32 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N | 0.67 | 49.0 | 5.60e-01 | 97.9% | 97.8% |
| 1233 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.67 | 48.0 | 5.40e-01 | 98.8% | 93.7% |
| 1866791 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.66 | 45.0 | 4.41e-01 | 98.3% | 63.1% |
| 3785573 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 34.0 | 4.72e-01 | 95.0% | 99.2% |
| 1886797 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.66 | 50.0 | 4.93e-01 | 98.3% | 73.9% |
| 1234 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.65 | 49.0 | 5.43e-01 | 98.8% | 95.3% |
| 1687952 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.65 | 47.0 | 4.93e-01 | 99.2% | 79.7% |
| 1232 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.64 | 49.0 | 5.41e-01 | 98.8% | 95.4% |
| 3918177 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.64 | 41.0 | 5.00e-01 | 96.7% | 97.4% |
| 3901524 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.64 | 40.0 | 5.02e-01 | 95.8% | 100.0% |
| 3620151 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 31.0 | 4.43e-01 | 92.5% | 96.5% |
| 1219 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.64 | 46.0 | 5.12e-01 | 98.3% | 93.1% |
| 1933849 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.64 | 46.0 | 4.75e-01 | 97.9% | 78.0% |
| 4954560 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 34.0 | 4.58e-01 | 89.6% | 100.0% |
| 289259 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.63 | 48.0 | 5.02e-01 | 98.3% | 83.6% |
| 1269 | 10.7.1.1 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 › ASRT | 0.62 | 26.0 | 3.65e-01 | 95.4% | 77.6% |
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.62 | 47.0 | 4.72e-01 | 98.3% | 76.4% |
| 2044958 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.61 | 47.0 | 4.68e-01 | 98.3% | 74.8% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.61 | 46.0 | 4.69e-01 | 98.3% | 78.7% |
| 2100469 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.61 | 48.0 | 4.75e-01 | 98.8% | 76.2% |
| 1945727 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.61 | 46.0 | 4.56e-01 | 98.3% | 73.7% |
| 1949031 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.60 | 48.0 | 4.65e-01 | 98.3% | 75.0% |
| 2439648 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.60 | 48.0 | 4.62e-01 | 97.9% | 72.5% |
| 169772 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.60 | 46.0 | 4.64e-01 | 97.9% | 79.0% |
| 4102071 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.59 | 37.0 | 4.63e-01 | 95.4% | 100.0% |
| 3880815 | 10.3.1.14 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › CTHRC1_C | 0.59 | 34.0 | 4.37e-01 | 95.4% | 97.9% |
| 5052233 | 10.1.1.46 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › InhA-like_MAM | 0.58 | 36.0 | 4.15e-01 | 94.2% | 82.2% |
| 3230374 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.58 | 35.0 | 4.41e-01 | 94.6% | 96.7% |
| 1114663 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.58 | 54.0 | 4.78e-01 | 100.0% | 71.5% |
| 3075118 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.58 | 48.0 | 4.72e-01 | 98.8% | 80.2% |
| 4304353 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.57 | 36.0 | 4.46e-01 | 95.4% | 98.1% |
| 3282993 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.57 | 34.0 | 4.16e-01 | 96.2% | 92.0% |
| 4281343 | 10.9.1.0 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin | 0.57 | 37.0 | 4.44e-01 | 95.0% | 99.4% |
| 3382082 | 207.1.1.37 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID | 0.57 | 35.0 | 2.98e-01 | 96.2% | 36.6% |
| 4260622 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.57 | 31.0 | 4.17e-01 | 93.8% | 99.2% |
| 140026 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.57 | 42.0 | 4.13e-01 | 98.3% | 69.3% |
| 2443964 | 10.32.1.23 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Bac_rhamnosid | 0.57 | 28.0 | 3.88e-01 | 94.6% | 93.4% |
| 1498219 | 10.32.1.79 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › RhaB_D2 | 0.56 | 32.0 | 3.65e-01 | 90.0% | 74.2% |
| 3421758 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.55 | 31.0 | 4.02e-01 | 95.4% | 94.3% |
| 5039141 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.55 | 34.0 | 4.18e-01 | 94.2% | 96.7% |
| 1762256 | 10.32.1.51 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_35 | 0.55 | 30.0 | 3.95e-01 | 93.3% | 96.2% |
| 3717342 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 38.0 | 4.21e-01 | 96.7% | 85.5% |
| 3916902 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.54 | 34.0 | 4.23e-01 | 93.8% | 98.1% |
| 4218569 | 10.32.1.301 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › InhA-like_MAM | 0.53 | 34.0 | 4.03e-01 | 95.4% | 91.2% |
| 3296624 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 31.0 | 3.71e-01 | 95.8% | 86.9% |
| 5040256 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.51 | 32.0 | 3.90e-01 | 93.8% | 96.8% |
| 3987197 | 10.32.1.75 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GH101_dom-5 | 0.51 | 33.0 | 3.97e-01 | 93.8% | 96.4% |
| 3917302 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.51 | 33.0 | 3.90e-01 | 94.6% | 92.9% |
D2
medium
residues 1-90
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 73.9 | 1.40e-20 | 87.8% | 97.5% |