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putative_capsid_protein

Euk-Vir

Lake_Sarah-associated_circular_virus-1_Viruses.

putative_capsid_protein__YP_009237548__Lake_Sarah-associated_circular_virus-1_Viruses.__X

Identity

Accession:
YP_009237548 ↗
Protein ID:
putative_capsid_protein
Kingdom:
euk

Quality

74.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 99-110_225-329_341-386
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tq5A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.76 37.0 4.25e-01 97.5% 61.6%
4nplA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.68 40.0 3.66e-01 97.5% 44.6%
4qkbA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.64 38.0 3.59e-01 95.7% 50.3%
4yrdA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 33.0 3.73e-01 96.9% 64.7%
3cu7A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.63 39.0 4.56e-01 98.8% 87.0%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.63 38.0 4.59e-01 96.9% 91.5%
2yc2A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 36.0 4.00e-01 95.1% 72.7%
4dxzA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.60 35.0 4.13e-01 94.5% 82.9%
3skvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 36.0 3.70e-01 97.5% 61.0%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.59 40.0 4.57e-01 94.5% 94.0%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 4.60e-01 98.8% 68.2%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 4.52e-01 98.8% 74.1%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 4.95e-01 98.8% 89.1%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 53.0 4.56e-01 99.4% 74.9%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 52.0 4.43e-01 98.8% 61.5%
2e26A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 39.0 4.07e-01 98.2% 73.5%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 51.0 4.46e-01 98.8% 69.9%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 51.0 4.30e-01 98.8% 63.4%
3zhnA00 2.60.40.4150 Mainly Beta › Sandwich › Immunoglobulin-like › Type VI secretion system, lipoprotein SciN 0.56 43.0 4.70e-01 88.3% 99.2%
6f2sH01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 4.56e-01 96.9% 80.0%
1gwmA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.56 34.0 3.51e-01 95.7% 62.7%
1a6cA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 4.69e-01 98.8% 87.9%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 4.05e-01 98.8% 60.6%
3c12A02 2.60.40.4070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 31.0 3.98e-01 89.6% 100.0%
3wnoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 34.0 4.14e-01 97.5% 100.0%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 50.0 4.03e-01 99.4% 75.6%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 50.0 4.19e-01 98.8% 62.5%
3s7vC00 2.60.175.10 Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Capsid protein VP1,Polyomavirus 0.55 48.0 4.15e-01 98.8% 89.9%
3qdhA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 4.20e-01 98.2% 81.4%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 4.17e-01 98.8% 60.8%
3bfqG00 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.54 39.0 4.25e-01 95.7% 90.9%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.54 39.0 4.20e-01 98.8% 88.9%
1tg7A04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 36.0 3.64e-01 99.4% 64.7%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 4.24e-01 97.5% 100.0%
5tf0B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 31.0 3.59e-01 94.5% 81.1%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.44e-01 98.8% 76.9%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 4.12e-01 96.9% 84.2%
3cwzB03 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.53 30.0 3.35e-01 88.3% 70.2%
2wmpB00 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.53 36.0 4.03e-01 95.7% 91.1%
1gnyA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 37.0 3.84e-01 97.5% 77.8%
3d34B01 2.60.40.2130 Mainly Beta › Sandwich › Immunoglobulin-like › F-spondin domain 0.52 45.0 4.47e-01 92.0% 98.2%
2bbaA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 42.0 4.04e-01 96.3% 75.1%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 47.0 3.94e-01 98.8% 74.1%
6tfjA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 34.0 3.94e-01 95.1% 93.9%
4w6yA00 2.60.120.1210 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 4.20e-01 96.9% 90.4%
5hbaA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.51 37.0 4.03e-01 98.8% 90.2%
3g7dA03 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 32.0 3.60e-01 86.5% 80.6%
2x9zA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 4.16e-01 96.3% 88.6%
3uxfA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 4.06e-01 96.9% 82.5%
1l9nA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 35.0 3.99e-01 98.2% 100.0%
3hr6A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 38.0 3.89e-01 94.5% 82.2%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3938968 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.69 44.0 5.09e-01 95.7% 89.6%
5001041 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 42.0 5.00e-01 95.7% 93.6%
4464442 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.66 43.0 5.06e-01 96.3% 97.3%
3275295 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.65 43.0 4.96e-01 96.9% 90.8%
4415823 10.32.1.246 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PalB_C 0.65 45.0 4.91e-01 96.9% 85.2%
4980338 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 42.0 4.88e-01 96.3% 91.3%
4025027 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.65 39.0 4.56e-01 96.3% 86.4%
3183254 10.32.1.237 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Mid1 0.65 45.0 4.96e-01 95.7% 88.5%
3780635 10.32.1.184 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Androglobin_II 0.63 41.0 4.36e-01 96.3% 73.1%
3788037 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.63 40.0 4.74e-01 95.7% 94.5%
3703659 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.62 48.0 5.04e-01 96.3% 90.3%
4026938 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 43.0 4.81e-01 97.5% 94.4%
3724772 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 44.0 4.72e-01 96.9% 87.1%
4960943 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 39.0 4.55e-01 95.7% 94.5%
5083968 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 42.0 4.75e-01 95.7% 93.6%
3999001 10.7.1.0 beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.60 38.0 4.69e-01 92.6% 100.0%
3719095 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 48.0 4.86e-01 96.9% 85.6%
5039612 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 41.0 4.71e-01 96.3% 97.5%
3781273 10.32.1.175 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Rax2_3 0.59 42.0 4.18e-01 98.2% 68.8%
3483008 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.59 45.0 4.60e-01 96.3% 81.2%
3601923 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 46.0 4.41e-01 96.3% 70.0%
3617942 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 39.0 4.16e-01 96.3% 77.1%
3691986 10.32.1.246 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PalB_C 0.59 44.0 4.55e-01 97.5% 82.6%
3611465 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 43.0 4.56e-01 96.9% 88.6%
5039342 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 37.0 3.96e-01 96.9% 73.1%
5010847 10.2.1.72 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA 0.57 38.0 4.29e-01 98.2% 88.0%
2505858 10.2.1.88 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.57 47.0 4.40e-01 97.5% 71.6%
5039545 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 42.0 4.73e-01 93.9% 100.0%
3700413 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 43.0 3.98e-01 96.9% 61.4%
5031167 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 41.0 4.23e-01 98.2% 77.4%
3961820 10.20.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.57 37.0 4.41e-01 92.6% 96.4%
4440530 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 40.0 4.27e-01 96.9% 81.4%
5012622 10.48.1.0 beta sandwiches › jelly-roll › Camelysin metallo-endopeptidase-like › Camelysin metallo-endopeptidase-like 0.57 45.0 4.63e-01 96.9% 86.7%
1236190 11.1.5.45 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › GramPos_pilinBB 0.56 40.0 4.10e-01 96.9% 76.0%
4062548 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.56 46.0 4.60e-01 99.4% 84.8%
3231885 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 37.0 4.15e-01 95.7% 86.4%
2841541 10.2.1.11 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gemini_coat 0.56 51.0 4.60e-01 98.8% 80.3%
4942248 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 44.0 4.61e-01 96.9% 93.1%
3601278 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 39.0 4.10e-01 96.3% 80.7%
1697855 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.55 46.0 4.05e-01 98.8% 60.6%
3693261 10.2.1.72 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA 0.55 37.0 3.82e-01 98.2% 71.0%
3937082 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.54 34.0 3.94e-01 99.4% 87.8%
3266615 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 37.0 4.07e-01 98.2% 86.9%
3684706 10.32.1.240 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PNGaseA 0.53 37.0 4.09e-01 98.2% 89.2%
3707025 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 43.0 4.43e-01 98.2% 92.3%
4012587 10.32.1.232 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 0.52 40.0 4.02e-01 98.2% 77.6%
3939165 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 36.0 4.16e-01 97.5% 100.0%
5051137 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 41.0 4.08e-01 96.3% 80.6%
5036914 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 39.0 4.33e-01 85.3% 100.0%
D2 high residues 112-222
PDB
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jzjC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 38.0 4.56e-01 96.4% 90.0%
2xqyA03 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.64 41.0 3.93e-01 82.9% 54.1%
1svdM00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.64 48.0 4.90e-01 91.9% 81.5%
5mz2I00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.64 50.0 4.61e-01 92.8% 65.5%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.64 46.0 4.92e-01 86.5% 87.5%
4eq3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 46.0 4.85e-01 98.2% 86.7%
1c7sA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 35.0 4.28e-01 93.7% 90.9%
1y6kR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 46.0 4.78e-01 98.2% 84.3%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.62 46.0 4.62e-01 85.6% 77.5%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 38.0 4.17e-01 94.6% 77.9%
3lqmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 43.0 4.66e-01 98.2% 88.9%
2jllA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 44.0 4.62e-01 95.5% 83.7%
2cuhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 42.0 4.55e-01 99.1% 88.6%
5e55B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 45.0 4.82e-01 98.2% 91.4%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.61 46.0 4.71e-01 86.5% 82.6%
5e53A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 44.0 4.71e-01 98.2% 90.3%
2v5yA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 43.0 4.60e-01 95.5% 86.3%
3tesA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 4.54e-01 95.5% 86.2%
1x5fA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 43.0 4.26e-01 96.4% 70.0%
5utkA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 41.0 4.58e-01 96.4% 95.2%
4es8B02 2.60.40.3580 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 4.58e-01 97.3% 87.1%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.58 46.0 4.57e-01 86.5% 83.2%
2r2cB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 4.73e-01 100.0% 88.1%
1f6fB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 4.42e-01 96.4% 87.6%
3cxeC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 4.45e-01 100.0% 88.8%
1burS00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.57 48.0 4.65e-01 91.9% 82.9%
4dohE02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 4.54e-01 95.5% 87.7%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 44.0 3.98e-01 83.8% 89.1%
1zq7A01 3.30.700.20 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 0.57 45.0 4.32e-01 99.1% 75.6%
4eq3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 4.53e-01 96.4% 88.0%
7solA02 3.10.290.60 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-activating enzyme E1, UFD domain 0.57 41.0 4.22e-01 96.4% 81.6%
1c77B00 3.10.20.130 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 39.0 3.78e-01 89.2% 62.5%
2fauA02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 4.41e-01 91.9% 94.2%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 44.0 3.65e-01 87.4% 90.2%
3bpnC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 4.36e-01 97.3% 92.1%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 3.87e-01 87.4% 86.6%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 30.0 3.02e-01 86.5% 52.2%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 29.0 3.42e-01 96.4% 78.9%
2o6cA00 2.60.40.2480 Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type 0.53 47.0 4.20e-01 99.1% 96.2%
1neuA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 4.32e-01 98.2% 87.0%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 36.0 3.62e-01 75.7% 69.0%
4e9kA00 2.60.120.1350 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 0.52 45.0 3.54e-01 96.4% 92.9%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 35.0 3.79e-01 72.1% 83.7%
4bkwA03 3.30.500.40 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.51 32.0 3.10e-01 99.1% 53.2%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.68e-01 85.6% 89.4%
3wbiA04 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 42.0 3.84e-01 88.3% 88.3%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3744648 11.1.1.470 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Psg1 0.67 48.0 5.07e-01 94.6% 83.0%
3915642 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 44.0 4.76e-01 95.5% 80.0%
3231573 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 46.0 4.62e-01 97.3% 71.8%
4083103 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.64 46.0 4.42e-01 82.9% 65.6%
4883629 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.64 48.0 4.82e-01 92.8% 77.9%
4076721 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.64 47.0 4.81e-01 86.5% 78.2%
3965278 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.64 46.0 4.68e-01 82.9% 75.5%
2157197 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.64 50.0 4.61e-01 92.8% 65.5%
4926832 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.63 46.0 4.43e-01 86.5% 67.2%
3639662 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 41.0 4.63e-01 70.3% 90.0%
4659490 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.63 47.0 4.67e-01 89.2% 75.7%
4035839 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.62 45.0 4.53e-01 86.5% 74.8%
3884004 11.1.1.1016 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30511 0.61 47.0 4.81e-01 97.3% 86.7%
4996629 511.1.1.0 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.61 44.0 4.14e-01 74.8% 86.9%
3554528 11.1.1.127 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL6Ra-bind 0.60 46.0 4.74e-01 99.1% 85.7%
3881057 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 44.0 4.59e-01 98.2% 87.0%
3912449 11.1.1.129 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.59 46.0 4.30e-01 99.1% 67.4%
3845950 11.1.1.129 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.58 44.0 4.38e-01 99.1% 78.3%
4235664 4139.1.1.1 a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 0.57 46.0 4.32e-01 99.1% 71.1%
4277361 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.57 49.0 4.52e-01 93.7% 80.4%
4519565 4139.1.1.0 a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like 0.57 46.0 4.48e-01 99.1% 78.4%
6101 221.1.1.15 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Staphylokinase 0.57 40.0 3.92e-01 89.2% 66.9%
3572304 11.1.1.129 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.56 44.0 4.11e-01 95.5% 67.4%
4962721 4139.1.1.1 a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 0.56 46.0 4.40e-01 99.1% 76.9%
3871678 11.1.1.129 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.56 44.0 4.50e-01 95.5% 88.6%
3567641 4187.2.1.1 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA 0.56 39.0 4.26e-01 80.2% 90.0%
3930803 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 46.0 4.23e-01 90.1% 92.4%
3337910 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.56 42.0 4.45e-01 81.1% 91.0%
4985317 4139.1.1.1 a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 0.56 40.0 4.18e-01 87.4% 84.0%
3553885 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.56 30.0 2.86e-01 86.5% 43.7%
3784003 302.1.1.0 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.55 44.0 3.98e-01 86.5% 85.2%
3622948 11.2.1.52 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem 0.55 48.0 4.36e-01 96.4% 79.3%
3291356 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.49e-01 91.9% 97.6%
3939276 221.1.1.30 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SAP18 0.55 44.0 4.25e-01 86.5% 96.8%
3722215 11.9.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase 0.55 48.0 3.45e-01 99.1% 52.4%
4551334 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 4.41e-01 95.5% 89.3%
3405565 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.54 42.0 4.49e-01 82.0% 98.9%
3646475 11.2.1.8 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 0.54 46.0 4.22e-01 96.4% 71.7%
4798319 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 48.0 4.11e-01 99.1% 92.8%
3878062 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 43.0 4.10e-01 85.6% 98.5%
3261392 206.1.3.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.54 44.0 3.52e-01 88.3% 70.0%
4000175 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 38.0 4.26e-01 97.3% 97.6%
4109061 4139.1.1.1 a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 0.54 39.0 4.03e-01 84.7% 84.0%
1944061 11.1.1.279 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TarS_C1 0.53 47.0 4.34e-01 96.4% 90.0%
3665778 878.1.1.2 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Helitron_like_N 0.53 40.0 3.46e-01 80.2% 100.0%
3938430 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 46.0 3.97e-01 96.4% 78.9%
3974767 272.1.1.0 a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain 0.53 33.0 3.51e-01 96.4% 72.6%
5011866 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.52 45.0 3.59e-01 96.4% 89.4%
5049721 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.52 43.0 4.14e-01 87.4% 80.8%
3413652 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.52 30.0 3.67e-01 84.7% 100.0%
4537304 11.1.1.279 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TarS_C1 0.52 46.0 4.22e-01 96.4% 88.3%
1158445 10.32.1.45 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4465 0.52 45.0 3.54e-01 96.4% 92.9%
3933716 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 46.0 4.16e-01 100.0% 70.3%
4530004 11.1.1.1125 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30142 0.52 40.0 3.93e-01 83.8% 82.4%
2723970 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.50 40.0 3.90e-01 85.6% 81.0%