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putative_capsid_protein

Euk-Vir

Bovine_faeces_associated_smacovirus_4

putative_capsid_protein__YP_009252323__Bovine_faeces_associated_smacovirus_4__1843752

Identity

Accession:
YP_009252323 ↗
Protein ID:
putative_capsid_protein
Kingdom:
euk

Quality

66.3 mean pLDDT

Taxonomy

Shotokuvirae› Cressdnaviricota› Arfiviricetes› Cremevirales› Smacoviridae› Cosmacovirus› Bovine_faeces_associated_smacovirus_4

TaxID: 1843752

Cluster

View cluster (49 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-160_265-297_318-350
PDB
Domain cluster: rep: putative_capsid_protein__YP_009252309__Sheep_faeces_associated_smacovirus_1__1843756__D5-168_280-313
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF23784.2 best Smaco_capsid 180.4 6.90e-53 72.0% 46.4%
PF23784.2 Smaco_capsid 28.7 9.30e-07 16.0% 8.9%
D2 medium residues 217-264_298-317
PDB