putative_coat_protein

Euk-Vir

Gremmeniella_abietina_RNA_virus_L1

putative_coat_protein__NP_624331__Gremmeniella_abietina_RNA_virus_L1__152217

Identity

77.4 mean pLDDT

View cluster (28 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 21-90_593-626

PDB

Domain cluster: rep: coat_protein__YP_001649205__Magnaporthe_oryzae_virus_2__441999__D12-46_287-310_434-452_593-610

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05518.18 best	Totivirus_coat	51.3	7.70e-14	70.2%	11.4%

D2 medium residues 91-119_134-168_192-204_278-293

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05518.18 best	Totivirus_coat	45.1	6.10e-12	81.7%	13.1%

D3 medium residues 120-133_169-191_205-277

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05518.18 best	Totivirus_coat	135.3	2.90e-39	100.0%	17.3%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ip8A00	1.10.132.110	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein	0.52	39.0	4.06e-01	79.1%	86.7%
2looA02	1.10.10.1740	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like	0.51	29.0	3.38e-01	80.9%	81.3%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4029621	5081.1.1.1 ↗	alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid	0.65	47.0	3.69e-01	94.5%	38.1%
5001718	141.1.1.3 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA	0.60	49.0	3.59e-01	100.0%	33.9%
3385852	5059.1.1.2 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Multi_Drug_Res	0.59	46.0	4.82e-01	99.1%	90.0%
3233605	5001.1.1.27 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre	0.58	38.0	2.74e-01	79.1%	24.8%
4931660	4271.1.1.3 ↗	alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N	0.52	44.0	3.68e-01	93.6%	85.6%
3836074	141.1.1.4 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C	0.51	41.0	2.93e-01	87.3%	79.1%

D4 medium residues 469-592_645-657

PDB

Domain cluster: rep: coat_protein__YP_009182166__Ustilaginoidea_virens_RNA_virus_5__1756615__D455-595_610-622

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05518.18 best	Totivirus_coat	131.5	4.10e-38	95.6%	18.9%