putative_coat_protein

Euk-Vir

Bemisia-associated_genomovirus_AdO

putative_coat_protein__YP_009388635__Bemisia-associated_genomovirus_AdO__1986478

Identity

74.1 mean pLDDT

Shotokuvirae› Cressdnaviricota› Repensiviricetes› Geplafuvirales› Genomoviridae› Gemycircularvirus› Bemisia-associated_genomovirus_AdO

TaxID: 1986478

View cluster (81 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 84-245

PDB

Domain cluster: rep: capsid_protein__YP_009465964__Varroa_mite_associated_genomovirus_1__2077299__D39-68_103-190_243-253

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4bcuA00	2.60.120.20	Mainly Beta › Sandwich › Jelly Rolls ›	0.74	52.0	4.96e-01	100.0%	62.2%
4msvA01	2.60.120.40	Mainly Beta › Sandwich › Jelly Rolls ›	0.63	39.0	4.24e-01	100.0%	72.3%
8hhvA01	2.60.120.260	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like	0.59	27.0	3.06e-01	99.4%	53.3%
6x3aA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.55	29.0	3.50e-01	100.0%	76.9%
1pm4A00	2.60.120.510	Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm	0.54	31.0	3.62e-01	100.0%	78.6%
5tf0B03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	30.0	3.52e-01	98.8%	81.1%
2bsyA02	2.70.40.10	Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase)	0.50	27.0	3.21e-01	100.0%	77.5%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4941212	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.58	30.0	3.65e-01	83.3%	77.0%
4517189	10.3.1.1 ↗	beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF	0.57	37.0	3.79e-01	100.0%	65.6%