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putative_coat_protein

Euk-Vir

Tomato_apical_leaf_curl_virus

putative_coat_protein__YP_009448199__Tomato_apical_leaf_curl_virus__2060142

Identity

Accession:
YP_009448199 ↗
Protein ID:
putative_coat_protein
Kingdom:
euk

Quality

71.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-241
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00844.25 best Gemini_coat 76.0 4.40e-21 99.5% 70.1%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6f2sH01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.90 82.0 7.81e-01 100.0% 82.8%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 73.0 7.38e-01 100.0% 88.3%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.76 41.0 5.27e-01 99.0% 87.2%
7tg5A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.72 31.0 4.06e-01 99.0% 70.1%
3rnsA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 30.0 3.91e-01 100.0% 68.5%
5zbeA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.69 30.0 3.98e-01 100.0% 72.0%
3h7jA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.69 30.0 3.87e-01 100.0% 67.5%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.67 47.0 5.47e-01 100.0% 99.3%
2qjvA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 33.0 4.17e-01 100.0% 77.9%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 52.0 5.35e-01 100.0% 84.8%
3ideA02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.64 46.0 5.29e-01 100.0% 98.6%
5jpnB04 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.64 37.0 4.54e-01 100.0% 89.3%
1tnrA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 46.0 5.23e-01 100.0% 98.6%
1cd3F00 2.60.169.10 Mainly Beta › Sandwich › Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1 › Microviridae F protein 0.63 60.0 4.49e-01 100.0% 94.4%
2b39A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.63 36.0 4.50e-01 100.0% 91.4%
3es4A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 28.0 3.50e-01 100.0% 65.5%
5fuiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 40.0 4.89e-01 99.5% 99.2%
2g9zB01 2.60.120.320 Mainly Beta › Sandwich › Jelly Rolls › Thiamin pyrophosphokinase, thiamin-binding domain 0.63 33.0 3.96e-01 98.4% 76.4%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 47.0 5.04e-01 100.0% 90.7%
4bbwA01 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 46.0 5.00e-01 98.4% 90.7%
6l9iA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 29.0 2.98e-01 97.9% 44.4%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.62 33.0 4.11e-01 98.4% 82.5%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.61 42.0 4.66e-01 100.0% 87.9%
7chkB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 42.0 4.85e-01 99.5% 98.5%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 52.0 4.64e-01 100.0% 65.1%
2fd8A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.60 33.0 3.34e-01 100.0% 50.3%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 47.0 5.13e-01 100.0% 96.2%
1fi2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 30.0 3.02e-01 99.5% 43.8%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 54.0 4.93e-01 100.0% 74.8%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.59 49.0 5.12e-01 100.0% 95.9%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 4.45e-01 100.0% 63.4%
3uyjA00 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.59 36.0 3.36e-01 98.4% 47.5%
1xf1A03 2.60.40.1710 Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily 0.59 38.0 4.50e-01 97.9% 93.9%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 45.0 5.00e-01 100.0% 99.4%
3jciA00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.58 50.0 5.02e-01 100.0% 91.1%
4c47A01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.57 34.0 4.14e-01 92.1% 90.2%
4lhsA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 41.0 4.63e-01 100.0% 94.6%
4i3gA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 34.0 4.28e-01 96.3% 98.2%
3j26N01 2.60.120.1100 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 4.69e-01 100.0% 92.9%
3q13A01 2.60.40.2130 Mainly Beta › Sandwich › Immunoglobulin-like › F-spondin domain 0.56 47.0 4.73e-01 88.0% 90.1%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.55 42.0 4.51e-01 100.0% 89.8%
4npjB01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 35.0 4.02e-01 81.7% 85.7%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 41.0 4.38e-01 99.5% 88.2%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 42.0 4.60e-01 97.9% 98.7%
4ae2B02 2.60.120.1000 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 4.60e-01 100.0% 95.3%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 49.0 4.55e-01 100.0% 98.7%
2ep6A01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 33.0 4.11e-01 81.2% 100.0%
3no8A00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.52 41.0 4.47e-01 99.0% 98.7%
4icwA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 34.0 4.13e-01 81.7% 97.7%
4l9bA02 2.60.120.1400 Mainly Beta › Sandwich › Jelly Rolls › Viral head domain of polysaccharide receptor-binding protein-like 0.52 49.0 4.75e-01 100.0% 89.7%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 4.66e-01 100.0% 98.9%
2w2iC00 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.51 37.0 3.18e-01 100.0% 45.5%
6ip0A01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.51 38.0 3.19e-01 100.0% 46.0%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 45.0 3.97e-01 100.0% 89.5%
1hx6B01 2.70.9.30 Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Viral coat protein p3 0.50 46.0 4.35e-01 100.0% 85.4%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2841541 10.2.1.11 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gemini_coat 0.90 82.0 7.76e-01 100.0% 81.7%
3108819 10.2.1.11 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gemini_coat 0.88 85.0 8.13e-01 100.0% 92.1%
222219 10.2.1.40 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TNV_CP 0.86 73.0 7.38e-01 100.0% 88.3%
4955989 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.85 43.0 6.14e-01 97.4% 100.0%
3245882 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.81 41.0 5.17e-01 99.0% 79.2%
5038652 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.80 44.0 5.85e-01 99.5% 97.1%
5026423 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.79 41.0 5.51e-01 99.0% 92.4%
5055086 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.78 40.0 5.57e-01 97.9% 100.0%
5074352 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.76 42.0 5.59e-01 99.5% 99.0%
3222807 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 41.0 5.26e-01 99.0% 93.0%
3291666 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 43.0 5.42e-01 100.0% 99.1%
3275875 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 39.0 5.02e-01 99.0% 95.2%
5083661 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 41.0 5.34e-01 99.5% 100.0%
5039644 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 42.0 5.29e-01 99.0% 99.1%
3872029 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.69 37.0 4.81e-01 100.0% 92.4%
4244782 10.2.1.55 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.67 41.0 4.92e-01 100.0% 92.0%
3614575 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 45.0 5.15e-01 100.0% 90.3%
151167 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.66 50.0 5.47e-01 100.0% 95.5%
3906314 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.65 49.0 5.41e-01 100.0% 96.7%
3476162 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.63 39.0 4.87e-01 100.0% 98.3%
3258412 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 41.0 4.85e-01 99.5% 92.6%
3364460 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.63 46.0 5.22e-01 99.0% 97.9%
3404051 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 47.0 5.20e-01 100.0% 97.4%
3251650 10.2.1.84 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Seipin 0.61 47.0 5.18e-01 99.0% 98.7%
3914225 10.32.1.283 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TGFb_propeptide 0.60 40.0 4.69e-01 94.2% 95.6%
3824997 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 43.0 3.02e-01 97.9% 24.1%
5050550 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 37.0 4.61e-01 94.8% 100.0%
3873657 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.59 43.0 4.13e-01 100.0% 65.6%
4629547 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.59 46.0 4.95e-01 100.0% 93.5%
3821996 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.59 45.0 3.71e-01 100.0% 46.2%
3206484 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 40.0 4.69e-01 94.2% 100.0%
3307728 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.58 41.0 4.42e-01 100.0% 84.4%
3808195 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 43.0 3.50e-01 99.0% 43.0%
3546323 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 48.0 5.02e-01 100.0% 96.0%
4882276 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.57 47.0 4.77e-01 94.8% 87.4%
None 0.57 43.0 3.03e-01 97.9% 26.7%
1043486 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.57 50.0 4.39e-01 100.0% 63.5%
3818089 10.2.1.82 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › C-JID 0.56 43.0 4.09e-01 99.5% 67.7%
1839925 11.2.1.4 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Spond_N 0.56 47.0 4.36e-01 88.0% 91.9%
3257581 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.56 42.0 4.69e-01 99.0% 98.1%
3393195 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.55 34.0 3.91e-01 78.5% 82.9%
4059551 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 37.0 4.27e-01 82.7% 92.9%
3474603 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 36.0 4.25e-01 81.7% 93.3%
3319581 11.2.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.55 43.0 4.66e-01 82.2% 98.2%
4160951 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.55 44.0 4.11e-01 100.0% 68.5%
3246669 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.55 38.0 4.30e-01 94.8% 95.7%
1878989 10.2.1.29 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid 0.54 49.0 4.80e-01 100.0% 90.3%
5033996 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 51.0 4.64e-01 100.0% 99.2%
4022751 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.54 50.0 4.74e-01 100.0% 97.3%
3805014 10.32.1.198 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 0.53 42.0 4.56e-01 99.5% 99.4%
3511589 11.2.1.7 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin 0.53 40.0 3.74e-01 88.5% 64.8%
4027865 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.53 35.0 4.15e-01 82.2% 97.7%
3474757 10.32.1.188 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM181_GOLD 0.52 42.0 4.53e-01 97.4% 100.0%
3608046 11.1.1.1317 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C, Rgp1 0.52 41.0 4.45e-01 95.8% 98.1%
4289134 10.1.1.26 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.52 40.0 4.25e-01 100.0% 90.5%
3244023 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.52 38.0 3.98e-01 82.2% 81.1%
3498815 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 4.59e-01 100.0% 98.8%
3678413 10.32.1.198 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 0.51 40.0 3.91e-01 99.5% 73.8%
3507431 11.2.1.7 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin 0.51 36.0 3.39e-01 81.7% 60.4%
3231482 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 41.0 4.22e-01 97.4% 88.3%
3351346 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 39.0 4.24e-01 82.2% 96.8%
3836543 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 38.0 4.06e-01 81.7% 87.6%
3609758 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.50 39.0 4.24e-01 81.7% 95.0%
3341907 10.2.1.70 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SURNod19 0.50 44.0 4.54e-01 100.0% 98.4%
3713749 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.50 39.0 4.12e-01 81.2% 100.0%