putative_coat_protein

Euk-Vir

Bipolaris_maydis_partitivirus_2

putative_coat_protein__YP_009551640__Bipolaris_maydis_partitivirus_2__2483307

Identity

57.1 mean pLDDT

Orthornavirae› Pisuviricota› Duplopiviricetes› Durnavirales› Partitiviridae› Bipolaris_maydis_partitivirus_2

TaxID: 2483307

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 88-220_329-367

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF25666.2 best	Partiti_capsid	160.0	1.40e-46	77.9%	20.8%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3f0cA02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.54	31.0	3.41e-01	91.3%	67.4%
1m1cA00	3.90.1840.10	Alpha Beta › Alpha-Beta Complex › Major capsid protein › Major capsid protein	0.53	47.0	3.24e-01	100.0%	53.3%
3h3mA00	1.20.58.380	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit.	0.50	24.0	3.15e-01	75.6%	83.1%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5075146	3962.1.1.0 ↗	alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit	0.53	39.0	4.07e-01	75.6%	99.4%
3387932	3962.1.1.0 ↗	alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit	0.52	39.0	3.79e-01	76.7%	96.3%
3833975	5050.1.1.46 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OPT	0.52	38.0	3.12e-01	76.7%	85.9%
3937015	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.52	39.0	3.56e-01	76.7%	90.9%

D2 medium residues 221-328

PDB

Domain cluster: rep: putative_capsid_protein__YP_003104769__Primula_malacoides_virus_China_Mar2007__479713__D178-292_349-369

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF25666.2 best	Partiti_capsid	96.9	1.70e-27	100.0%	17.8%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2v1nA01	1.10.10.2030	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain	0.50	38.0	3.94e-01	81.5%	88.1%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5043001	101.1.2.135 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR_2	0.53	36.0	3.69e-01	70.4%	82.9%
5000528	101.1.2.92 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_11	0.51	34.0	3.73e-01	79.6%	82.2%
3282318	101.1.2.135 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR_2	0.50	36.0	3.31e-01	75.0%	62.1%

D3 medium residues 368-416_458-472

PDB

D4 medium residues 417-457_536-554

PDB

D5 medium residues 473-535_581-653

PDB