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putative_crossover_junction_endonuclease_Mus81

Euk-Vir

Aureococcus_anophagefferens_virus

putative_crossover_junction_endonuclease_Mus81__YP_009052289__Aureococcus_anophagefferens_virus__1474867

Identity

Accession:
YP_009052289 ↗
Protein ID:
putative_crossover_junction_endonuclease_Mus81
Kingdom:
euk

Quality

78.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-132
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02732.22 best ERCC4 54.0 2.40e-14 93.1% 98.6%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bgwB01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.87 82.0 8.28e-01 99.2% 98.5%
1j24A00 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.87 81.0 8.14e-01 100.0% 97.0%
2a1iA01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.86 74.0 7.80e-01 98.5% 100.0%
2m9mA00 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.85 74.0 7.29e-01 100.0% 87.1%
3nd5A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 45.0 4.25e-01 70.2% 51.3%
2e87A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 62.0 5.41e-01 100.0% 86.7%
1egaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 61.0 5.50e-01 99.2% 91.2%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 44.0 4.51e-01 70.2% 67.4%
7fg9A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.67 44.0 4.14e-01 86.3% 53.7%
2qm0A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 60.0 4.86e-01 99.2% 87.6%
2cjwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 60.0 5.45e-01 100.0% 94.9%
2hxsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 59.0 5.36e-01 100.0% 94.4%
2xitA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 58.0 4.57e-01 98.5% 94.2%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 48.0 4.05e-01 77.9% 50.2%
2ph7A02 3.40.50.10670 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain 0.65 44.0 4.96e-01 73.3% 93.8%
1z2aA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 58.0 5.44e-01 100.0% 98.8%
6nazA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 58.0 5.47e-01 99.2% 98.7%
3c5cB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 58.0 5.34e-01 100.0% 98.8%
1d5cA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 57.0 5.36e-01 99.2% 99.4%
1u8zA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 58.0 5.36e-01 100.0% 97.0%
1z06A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 57.0 5.29e-01 98.5% 98.8%
2uz0A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.63 57.0 4.60e-01 100.0% 84.6%
6jmgB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 57.0 5.17e-01 100.0% 98.8%
6yuqA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 53.0 4.40e-01 96.2% 87.7%
1l5jA04 3.30.499.10 Alpha Beta › 2-Layer Sandwich › Aconitase; domain 3 › Aconitase, domain 3 0.61 40.0 4.12e-01 79.4% 68.0%
1auaA01 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.61 44.0 3.75e-01 74.8% 69.0%
1flaA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.60 53.0 5.27e-01 97.7% 100.0%
7w6bA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.60 52.0 4.13e-01 96.2% 100.0%
2f7sA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 53.0 4.84e-01 100.0% 93.3%
4dqlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.59 45.0 4.18e-01 78.6% 64.6%
2bpoA04 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.59 44.0 4.16e-01 78.6% 66.0%
4o1eB00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.59 47.0 3.77e-01 85.5% 81.6%
3d6iA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 38.0 4.18e-01 100.0% 79.1%
1iqpA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 46.0 4.25e-01 83.2% 89.9%
8b3yA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 52.0 3.94e-01 100.0% 99.4%
3u61C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 44.0 4.08e-01 80.9% 82.1%
5f2hA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 50.0 4.53e-01 99.2% 100.0%
1sxjE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 42.0 3.98e-01 77.9% 85.9%
7xjrA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 50.0 3.92e-01 100.0% 99.0%
1ig0A01 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.56 43.0 3.87e-01 100.0% 57.8%
1rliD00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.55 48.0 4.46e-01 97.7% 100.0%
6i3mE02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.55 46.0 3.99e-01 90.1% 86.0%
3rc3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 44.0 4.16e-01 87.0% 76.1%
4mzyA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 43.0 3.97e-01 84.0% 93.5%
8kcaB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 42.0 3.91e-01 84.0% 74.9%
3nohA00 3.40.190.210 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.53 36.0 3.74e-01 89.3% 73.8%
2cmgA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 47.0 4.01e-01 97.7% 73.5%
6ecpB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.53 44.0 4.25e-01 100.0% 80.7%
2rinA02 3.40.190.100 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Glycine betaine-binding periplasmic protein; domain 2 0.52 33.0 3.50e-01 91.6% 72.7%
2ok8A02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.52 42.0 4.03e-01 94.7% 75.2%
7xc2A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 3.65e-01 80.9% 90.0%
6j5tC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 3.72e-01 80.2% 68.0%
1b2rA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.51 42.0 3.88e-01 94.7% 70.1%
2l5oA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 41.0 3.92e-01 88.5% 76.0%
1jbkA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 41.0 3.70e-01 90.1% 87.3%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3821439 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.92 89.0 7.81e-01 100.0% 81.7%
3664248 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.92 88.0 7.61e-01 100.0% 78.9%
3639672 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.92 88.0 6.90e-01 100.0% 64.1%
3273735 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.92 88.0 7.28e-01 100.0% 76.7%
3269521 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.91 87.0 7.68e-01 100.0% 83.3%
3488253 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.91 87.0 7.17e-01 100.0% 78.1%
4021437 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.91 87.0 7.09e-01 100.0% 71.4%
3619138 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.91 87.0 7.73e-01 100.0% 80.0%
3600815 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.90 87.0 7.32e-01 100.0% 78.0%
3937765 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.90 87.0 7.70e-01 100.0% 79.4%
3702608 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.90 86.0 7.11e-01 100.0% 66.8%
4118447 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.90 86.0 6.88e-01 100.0% 63.4%
4447742 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.90 86.0 7.01e-01 100.0% 71.4%
3173824 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.90 86.0 7.07e-01 100.0% 67.9%
4882455 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.89 85.0 7.39e-01 100.0% 78.4%
4941529 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.87 82.0 7.82e-01 100.0% 86.0%
4996106 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.87 80.0 7.71e-01 100.0% 86.9%
3217738 2008.1.1.12 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Rad10 0.86 75.0 7.38e-01 99.2% 85.7%
3556196 2008.1.1.68 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PND 0.84 77.0 7.41e-01 100.0% 86.2%
3702525 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.84 79.0 7.46e-01 100.0% 92.9%
3500810 2008.1.1.68 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PND 0.84 70.0 7.35e-01 91.6% 95.0%
3883599 2008.1.1.68 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PND 0.84 77.0 7.65e-01 100.0% 93.3%
3571634 2008.1.1.89 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SCRE 0.83 78.0 7.20e-01 100.0% 80.6%
3924732 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.83 77.0 6.74e-01 100.0% 82.6%
3703753 2008.1.1.12 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Rad10 0.82 76.0 7.60e-01 100.0% 96.3%
3222402 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.80 75.0 6.35e-01 100.0% 78.5%
3614350 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.80 73.0 7.20e-01 99.2% 92.1%
3736568 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 70.0 6.58e-01 100.0% 91.0%
3495573 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.69 46.0 5.42e-01 96.9% 98.9%
3264033 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.68 62.0 5.18e-01 100.0% 90.7%
3229729 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.68 62.0 5.39e-01 100.0% 86.7%
4027367 2004.1.1.571 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras, MMR_HSR1 0.67 61.0 5.22e-01 100.0% 96.2%
3667202 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.66 44.0 5.22e-01 74.0% 98.9%
3923916 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.66 60.0 5.17e-01 100.0% 82.4%
3231335 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.66 60.0 5.24e-01 100.0% 86.2%
5052690 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.66 60.0 5.29e-01 100.0% 88.3%
3958176 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 57.0 5.50e-01 93.1% 100.0%
5073817 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.65 59.0 5.35e-01 100.0% 91.7%
3597502 2003.1.6.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.65 59.0 4.57e-01 100.0% 99.7%
4573155 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.65 48.0 3.82e-01 76.3% 43.1%
4337741 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.65 59.0 5.23e-01 100.0% 93.2%
5067896 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.65 59.0 5.22e-01 100.0% 90.0%
4094991 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.65 47.0 3.89e-01 75.6% 47.4%
3706503 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.65 49.0 4.18e-01 90.1% 49.5%
146898 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.65 48.0 3.92e-01 77.9% 45.4%
5073940 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.65 58.0 5.27e-01 100.0% 92.2%
3672744 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.65 59.0 4.90e-01 100.0% 88.0%
5052330 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 58.0 5.31e-01 100.0% 93.7%
3895426 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 58.0 5.01e-01 100.0% 78.0%
3840963 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 58.0 4.92e-01 100.0% 73.6%
3542662 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 58.0 5.05e-01 100.0% 81.5%
5036944 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.64 47.0 3.68e-01 76.3% 44.7%
3484939 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 58.0 5.18e-01 100.0% 90.8%
3772453 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 58.0 5.09e-01 100.0% 85.6%
4066196 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 58.0 5.12e-01 100.0% 88.4%
3940369 2007.9.1.0 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain 0.64 57.0 5.56e-01 99.2% 98.6%
4614930 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.64 48.0 3.90e-01 77.9% 46.4%
3565715 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 58.0 5.17e-01 100.0% 90.2%
4052516 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.64 47.0 3.84e-01 76.3% 48.1%
3619274 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 57.0 4.89e-01 100.0% 81.9%
3603340 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.63 47.0 3.77e-01 77.1% 50.0%
3475946 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.63 57.0 4.80e-01 100.0% 74.1%
1254323 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.63 57.0 5.07e-01 99.2% 98.9%
3250105 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.63 57.0 4.81e-01 100.0% 90.5%
3892671 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.63 57.0 4.92e-01 100.0% 82.4%
3774352 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.63 56.0 5.04e-01 99.2% 88.1%
4295862 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.62 46.0 3.66e-01 76.3% 42.7%
5073860 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 49.0 4.83e-01 87.0% 79.9%
1160074 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.60 45.0 4.17e-01 77.9% 65.4%
3254140 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.60 45.0 4.11e-01 79.4% 69.1%
3311002 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.60 53.0 3.63e-01 100.0% 97.6%
3998993 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.59 49.0 4.96e-01 99.2% 90.8%
3173227 7528.1.1.1 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_I 0.58 44.0 3.89e-01 77.9% 74.2%
3937233 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 37.0 3.51e-01 77.1% 53.1%
5010471 2004.1.1.343 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.55 44.0 3.87e-01 84.7% 76.4%
3280948 2002.1.1.354 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF6986 0.55 49.0 3.56e-01 100.0% 88.1%
4009283 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.54 42.0 3.88e-01 82.4% 70.6%
5062874 2004.1.1.343 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.53 44.0 3.71e-01 87.8% 69.8%
3672771 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.53 42.0 3.14e-01 83.2% 47.5%
5073822 7512.1.1.2 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Phosphorylase 0.51 41.0 3.98e-01 86.3% 76.0%
D2 high residues 149-228
PDB
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ziuA02 1.10.150.670 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Crossover junction endonuclease EME1, DNA-binding domain 0.84 68.0 6.75e-01 85.0% 92.8%
4bxoB02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.83 59.0 6.44e-01 83.7% 90.8%
5tt5A05 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.81 58.0 5.91e-01 80.0% 76.6%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.81 57.0 6.17e-01 81.2% 88.1%
1bvsA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.77 57.0 6.04e-01 82.5% 90.0%
2ziwB02 1.10.150.670 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Crossover junction endonuclease EME1, DNA-binding domain 0.76 70.0 6.52e-01 100.0% 90.8%
3zdbA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.75 56.0 5.36e-01 83.7% 69.7%
1z00B00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.74 53.0 5.28e-01 87.5% 72.6%
5cb1A02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.70 47.0 5.10e-01 85.0% 87.3%
2eduA01 1.10.150.280 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AF1531-like domain 0.66 45.0 4.55e-01 80.0% 70.4%
5k97A02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.64 43.0 4.67e-01 85.0% 82.4%
3f4sA02 1.10.40.80 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › 0.58 40.0 4.40e-01 75.0% 90.6%
3tdvA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.57 46.0 3.49e-01 91.3% 65.5%
4uobA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.56 44.0 3.90e-01 95.0% 56.3%
1aa1B02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.56 45.0 3.12e-01 92.5% 92.5%
2g7rA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.52 31.0 3.10e-01 82.5% 54.7%
2cqnA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.51 37.0 3.77e-01 87.5% 79.2%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4183966 102.1.1.41 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C 0.89 74.0 7.22e-01 86.3% 97.6%
3218927 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.89 72.0 7.66e-01 83.7% 98.6%
3182631 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.88 72.0 6.71e-01 85.0% 98.9%
3785191 102.1.1.41 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C 0.87 71.0 7.04e-01 86.3% 98.8%
4243451 102.1.1.41 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C 0.87 69.0 6.99e-01 83.7% 98.7%
3640484 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.87 73.0 6.71e-01 88.7% 94.0%
3259834 102.1.1.41 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C 0.85 72.0 7.29e-01 88.7% 98.8%
3738831 102.1.1.41 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C 0.85 72.0 7.10e-01 88.7% 96.4%
4001271 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.85 53.0 6.45e-01 76.2% 100.0%
3619139 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.85 68.0 7.22e-01 83.7% 100.0%
5035601 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.84 60.0 6.79e-01 83.7% 100.0%
4024726 102.1.1.41 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C 0.83 78.0 6.94e-01 100.0% 83.5%
1095162 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.83 59.0 6.28e-01 83.7% 85.5%
5039909 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.83 60.0 6.75e-01 80.0% 100.0%
3488252 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.83 70.0 6.95e-01 90.0% 97.6%
4997394 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.82 60.0 6.55e-01 85.0% 93.8%
5071974 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.82 57.0 6.49e-01 80.0% 96.7%
4985432 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.82 66.0 6.95e-01 100.0% 94.5%
4948197 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.82 59.0 6.48e-01 85.0% 93.8%
4956353 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.82 61.0 6.18e-01 88.7% 78.8%
3743102 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.82 64.0 6.64e-01 98.8% 89.3%
4974337 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 65.0 6.72e-01 98.8% 90.7%
4998924 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.81 65.0 7.04e-01 98.8% 100.0%
4945738 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 62.0 6.61e-01 90.0% 92.9%
4016475 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 64.0 6.60e-01 98.8% 89.3%
4347805 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.81 59.0 6.15e-01 83.7% 83.6%
4209912 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.81 61.0 6.31e-01 83.7% 85.3%
4141107 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.80 59.0 5.95e-01 86.3% 77.5%
3760953 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.80 59.0 6.27e-01 85.0% 88.6%
3785675 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.80 64.0 6.78e-01 85.0% 97.1%
4976936 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.80 58.0 6.32e-01 85.0% 93.8%
3170374 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.80 64.0 6.42e-01 100.0% 85.0%
5032066 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.80 62.0 6.60e-01 98.8% 95.7%
5048009 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.79 62.0 6.58e-01 100.0% 95.7%
4669189 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.79 64.0 6.62e-01 100.0% 92.0%
4664974 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.79 62.0 6.64e-01 86.3% 95.7%
3634419 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.79 75.0 6.85e-01 100.0% 85.0%
None 0.79 60.0 6.16e-01 83.7% 85.3%
None 0.79 62.0 6.57e-01 86.3% 95.7%
3260046 102.1.1.41 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C 0.78 73.0 6.71e-01 100.0% 88.0%
3743154 102.1.1.41 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C 0.78 73.0 6.88e-01 100.0% 84.2%
5032485 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.78 57.0 6.23e-01 95.0% 95.4%
3847449 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.78 57.0 5.79e-01 85.0% 77.5%
4291332 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.78 58.0 5.88e-01 83.7% 80.0%
3990326 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.78 71.0 6.59e-01 100.0% 86.0%
4941530 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.78 61.0 6.34e-01 97.5% 90.7%
4410020 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.77 61.0 5.86e-01 87.5% 74.4%
4945831 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.77 55.0 5.82e-01 85.0% 84.3%
5058256 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.77 55.0 5.97e-01 83.7% 92.3%
None 0.77 58.0 6.00e-01 83.7% 85.3%
5053952 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.76 60.0 6.29e-01 98.8% 93.2%
3624647 102.1.1.41 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C 0.76 70.0 6.44e-01 100.0% 88.0%
5041963 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.76 59.0 5.84e-01 93.8% 78.8%
3596715 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.76 62.0 6.23e-01 88.7% 90.0%
None 0.76 57.0 5.85e-01 83.7% 85.3%
4970811 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.75 59.0 6.11e-01 98.8% 90.7%
3512669 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.75 67.0 6.28e-01 95.0% 92.6%
4001438 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.75 55.0 5.44e-01 83.7% 72.9%
5073926 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.75 57.0 5.74e-01 81.2% 93.8%
4927025 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.75 59.0 5.92e-01 100.0% 85.0%
5067510 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.74 59.0 6.29e-01 90.0% 98.6%
4933502 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.74 67.0 6.63e-01 100.0% 94.1%
4599951 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.74 57.0 6.09e-01 86.3% 94.3%
4961987 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.74 59.0 5.62e-01 86.3% 72.6%
4364220 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.74 58.0 5.01e-01 85.0% 55.0%
4983339 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.74 59.0 5.95e-01 86.3% 97.5%
4969156 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.74 55.0 5.53e-01 86.3% 78.8%
3237905 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.74 65.0 6.14e-01 96.2% 90.4%
5041781 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.72 52.0 5.61e-01 85.0% 93.8%
5042901 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.72 58.0 5.87e-01 87.5% 95.0%
4939552 3054.1.1.0 alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol 0.68 46.0 4.59e-01 83.7% 67.5%
5077603 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.63 53.0 4.93e-01 97.5% 84.8%
3796068 148.1.3.40 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ORC5_lid 0.51 37.0 3.58e-01 80.0% 86.3%