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putative_cysteine_protease

Euk-Vir

Cafeteria_roenbergensis_virus_BV-PW1

putative_cysteine_protease__YP_003969816__Cafeteria_roenbergensis_virus_BV-PW1__693272

Identity

Accession:
YP_003969816 ↗
Protein ID:
putative_cysteine_protease
Kingdom:
euk

Quality

70.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Rheavirus› Cafeteria_roenbergensis_virus_BV-PW1

TaxID: 693272

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 98-290
PDB
Domain cluster: rep: hypothetical_protein_crov231__YP_003969863__Cafeteria_roenbergensis_virus_BV-PW1__693272__D45-278
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03421.24 best Acetyltransf_14 32.5 1.10e-07 89.6% 42.0%
PF02902.26 Peptidase_C48 48.1 1.90e-12 75.1% 51.1%
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6upsA01 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.83 64.0 7.15e-01 100.0% 99.4%
1th0B00 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.75 63.0 5.96e-01 100.0% 74.9%
1xt9A00 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.75 64.0 6.27e-01 100.0% 82.7%
4ekfA00 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.69 59.0 5.92e-01 100.0% 88.0%
1euvA02 3.30.310.130 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Ubiquitin-related 0.66 37.0 4.93e-01 83.9% 100.0%
1i74A02 3.10.310.20 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain 0.59 34.0 4.13e-01 87.0% 89.1%
7c2fB01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.58 28.0 4.02e-01 78.2% 100.0%
6ll8A02 3.10.310.20 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain 0.58 34.0 4.11e-01 88.6% 90.0%
2c1iA01 3.30.565.50 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.55 29.0 3.61e-01 100.0% 83.8%
4uuwA03 3.90.950.20 Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like 0.54 36.0 4.02e-01 88.6% 86.4%
3thxB02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.53 33.0 3.62e-01 89.6% 75.7%
3ly7A01 3.40.50.11830 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 33.0 3.62e-01 100.0% 75.2%
2hqsA01 3.40.50.10070 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain 0.52 36.0 4.14e-01 93.8% 95.1%
3mbhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 48.0 4.16e-01 100.0% 89.6%
1gcaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 31.0 3.42e-01 93.3% 70.8%
1ewqA02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.51 27.0 3.27e-01 89.1% 77.1%
1d0nA03 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.51 30.0 3.62e-01 88.1% 88.4%
1lhpA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 47.0 4.03e-01 100.0% 91.5%
2h3hB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 3.39e-01 94.8% 72.6%
4e69A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 46.0 3.93e-01 100.0% 93.2%
5ysqB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 46.0 4.06e-01 100.0% 95.0%
3d8uB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 30.0 3.34e-01 90.2% 73.3%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3437716 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.79 45.0 5.63e-01 91.7% 88.6%
None — 0.78 63.0 6.03e-01 100.0% 74.4%
7400 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.78 63.0 5.99e-01 100.0% 72.9%
3466516 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.76 63.0 5.81e-01 100.0% 69.2%
3660659 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.76 62.0 5.59e-01 100.0% 64.8%
3696004 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.76 65.0 6.01e-01 100.0% 72.8%
3416006 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.76 64.0 5.95e-01 100.0% 73.0%
3783242 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.75 62.0 5.80e-01 100.0% 71.3%
3681708 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.75 60.0 4.42e-01 100.0% 34.4%
3498187 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.75 64.0 5.97e-01 100.0% 73.2%
3209165 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.75 64.0 5.85e-01 100.0% 70.2%
3404797 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.74 62.0 6.07e-01 100.0% 81.3%
3994259 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.73 63.0 5.84e-01 100.0% 73.6%
3256272 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.71 63.0 5.84e-01 100.0% 75.6%
2439649 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.71 68.0 6.23e-01 100.0% 90.5%
3369707 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.71 62.0 5.35e-01 100.0% 61.4%
3410176 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.71 62.0 5.99e-01 100.0% 82.3%
2624943 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.70 67.0 6.16e-01 100.0% 91.6%
3189169 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.70 63.0 5.96e-01 100.0% 80.8%
4026880 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.70 63.0 5.83e-01 100.0% 75.8%
3737961 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.70 62.0 5.95e-01 100.0% 83.3%
3738382 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.70 61.0 5.65e-01 100.0% 74.2%
3437661 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.69 63.0 5.53e-01 100.0% 68.1%
3788927 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.68 62.0 5.66e-01 100.0% 74.6%
3322297 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.68 64.0 5.67e-01 100.0% 79.6%
3334305 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.68 64.0 5.78e-01 100.0% 83.1%
3381005 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.68 64.0 5.65e-01 100.0% 79.3%
3698900 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.68 64.0 5.46e-01 100.0% 71.2%
3641229 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.65 43.0 4.36e-01 76.2% 66.8%
3826691 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.64 60.0 5.45e-01 100.0% 79.5%
3677902 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.64 60.0 4.16e-01 100.0% 33.1%
3826010 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.64 60.0 5.29e-01 100.0% 74.4%
3644493 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.64 49.0 3.82e-01 100.0% 38.4%
3459162 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.63 58.0 5.17e-01 100.0% 70.0%
1870510 219.1.1.20 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_14 0.62 59.0 4.90e-01 100.0% 81.3%
3678661 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.62 58.0 4.14e-01 100.0% 40.0%
3448699 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.62 57.0 5.55e-01 100.0% 90.5%
3421699 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.61 57.0 5.07e-01 100.0% 71.1%
3674297 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.61 42.0 4.89e-01 79.8% 96.4%
3682520 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.60 51.0 3.99e-01 88.6% 46.5%
3822712 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.60 53.0 5.33e-01 94.8% 92.9%
3645109 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 53.0 3.67e-01 93.8% 31.3%
5071835 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.59 29.0 4.11e-01 85.0% 100.0%
2643927 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.58 29.0 4.06e-01 79.3% 100.0%
4997307 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.58 30.0 4.08e-01 89.6% 95.0%
3669158 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.58 49.0 4.58e-01 89.1% 94.9%
5000415 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.57 29.0 3.80e-01 80.3% 86.7%
3458803 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.56 43.0 4.17e-01 78.8% 72.9%
3364428 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.55 47.0 4.48e-01 97.4% 78.2%
3654558 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.55 44.0 4.73e-01 96.9% 95.9%
5051316 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.55 31.0 4.00e-01 87.0% 99.0%
3682165 2484.1.1.153 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.55 35.0 3.62e-01 90.7% 66.7%
5072973 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.53 30.0 3.91e-01 91.7% 99.0%
3944872 7503.1.1.10 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CadC_C1 0.53 33.0 3.82e-01 100.0% 85.0%
4947247 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.53 30.0 3.89e-01 80.8% 97.3%
3819272 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.52 35.0 3.66e-01 91.2% 70.8%
3619235 2484.1.1.153 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.51 33.0 2.79e-01 90.7% 38.2%
4587441 2003.6.1.5 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.51 46.0 4.03e-01 100.0% 88.0%
D2 medium residues 1-89
PDB