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putative_glycoprotein
Euk-VirShahe_heteroptera_virus_3
putative_glycoprotein__YP_009329878__Shahe_heteroptera_virus_3__1923419
Identity
- Accession:
- YP_009329878 ↗
- Protein ID:
- putative_glycoprotein
- Kingdom:
- euk
Quality
60.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 284-363
Domain cluster:
rep: glycoprotein_precursor__YP_009664619__Gouleako_virus__603003__D273-344
D2
high
residues 578-675_719-795
Domain cluster:
rep: glycoprotein_precursor__YP_009362036__Kigluaik_phantom_orthophasmavirus__1980539__D304-407_471-524
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07245.17 best | Phlebovirus_G2 | 97.6 | 1.00e-27 | 58.3% | 31.0% |
| PF07245.17 | Phlebovirus_G2 | 54.0 | 1.90e-14 | 44.6% | 23.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ok8A03 | 3.30.387.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 3 › Viral Envelope Glycoprotein, domain 3 | 0.68 | 34.0 | 4.74e-01 | 92.6% | 100.0% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.64 | 26.0 | 3.64e-01 | 74.9% | 73.3% |
| 3m86A00 | 2.60.40.2020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 24.0 | 3.02e-01 | 77.7% | 55.9% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 23.0 | 2.98e-01 | 77.7% | 65.2% |
| 2i6gB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 25.0 | 2.42e-01 | 77.1% | 37.2% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.54 | 28.0 | 3.59e-01 | 79.4% | 88.3% |
| 7d58G01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.51 | 24.0 | 3.40e-01 | 77.7% | 100.0% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2772148 | 5090.1.1.5 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Phlebovirus_G2 | 0.84 | 81.0 | 6.34e-01 | 100.0% | 65.5% |
| 1839942 | 5090.1.1.5 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Phlebovirus_G2 | 0.80 | 75.0 | 5.92e-01 | 100.0% | 64.5% |
| 2531649 | 5090.1.1.5 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Phlebovirus_G2 | 0.78 | 74.0 | 5.85e-01 | 100.0% | 66.2% |
| 3940428 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.69 | 65.0 | 4.96e-01 | 100.0% | 66.3% |
| 3500531 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.69 | 64.0 | 5.07e-01 | 100.0% | 69.9% |
| 3626193 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.69 | 64.0 | 4.91e-01 | 100.0% | 65.0% |
| 3998845 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.68 | 64.0 | 4.93e-01 | 100.0% | 63.6% |
| 3938676 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.68 | 63.0 | 4.90e-01 | 100.0% | 65.1% |
| 3938228 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.68 | 61.0 | 4.83e-01 | 96.0% | 64.3% |
| 3245955 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.68 | 63.0 | 4.95e-01 | 100.0% | 69.1% |
| 2443887 | 11.1.1.130 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 | 0.63 | 24.0 | 3.05e-01 | 77.7% | 57.1% |
| 142226 | 11.1.1.130 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 | 0.61 | 24.0 | 3.02e-01 | 77.7% | 55.9% |
| 4861488 | 5090.1.1.1 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Flavi_glycoprot | 0.59 | 54.0 | 4.50e-01 | 100.0% | 71.5% |
| 2330240 | 5090.1.1.1 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Flavi_glycoprot | 0.57 | 52.0 | 4.31e-01 | 100.0% | 69.3% |
| 3417210 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.53 | 28.0 | 3.79e-01 | 94.3% | 98.9% |
| 3960033 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.53 | 25.0 | 2.56e-01 | 77.1% | 44.1% |
| 3874027 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.50 | 38.0 | 3.18e-01 | 95.4% | 44.2% |
D3
medium
residues 132-189_237-273
D4
medium
residues 516-563_694-718_796-845
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u7lA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 25.0 | 2.84e-01 | 79.7% | 55.6% |
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 35.0 | 4.04e-01 | 100.0% | 92.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057515 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.63 | 25.0 | 3.34e-01 | 95.9% | 68.3% |
| 2772148 | 5090.1.1.5 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Phlebovirus_G2 | 0.61 | 53.0 | 3.89e-01 | 95.1% | 96.7% |
| 3305653 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.59 | 30.0 | 3.97e-01 | 95.9% | 87.1% |
D5
medium
residues 846-952