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putative_glycoprotein

Euk-Vir

Beihai_barnacle_virus_9

putative_glycoprotein__YP_009333176__Beihai_barnacle_virus_9__1922367

Identity

Accession:
YP_009333176 ↗
Protein ID:
putative_glycoprotein
Kingdom:
euk

Quality

68.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 69-207
PDB
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.62 29.0 4.18e-01 97.8% 100.0%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.61 26.0 3.68e-01 71.9% 82.1%
5kycB02 2.20.210.10 Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › ubp-family deubiquitinating enzyme superfamily 0.60 25.0 3.81e-01 72.7% 100.0%
1uenA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 28.0 2.92e-01 93.5% 48.0%
2d73A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 29.0 3.16e-01 97.8% 57.5%
2mcfA00 3.40.50.11630 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 38.0 3.74e-01 97.8% 68.2%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.51 27.0 2.98e-01 84.2% 60.4%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4636309 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.65 47.0 4.06e-01 74.8% 94.4%
1503409 220.3.1.1 beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop 0.64 49.0 5.07e-01 100.0% 86.4%
3517068 3115.1.1.6 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.63 31.0 4.35e-01 91.4% 100.0%
2124211 220.3.1.2 beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 0.63 58.0 5.55e-01 100.0% 93.1%
2464208 220.3.1.2 beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 0.62 58.0 5.52e-01 100.0% 93.1%
185186 220.3.1.2 beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 0.62 57.0 5.47e-01 100.0% 94.9%
3280008 3115.1.1.2 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4288 0.61 38.0 4.55e-01 97.1% 95.6%
2124201 220.3.1.2 beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 0.60 55.0 5.29e-01 100.0% 94.9%
3516207 327.6.1.6 a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin 0.59 42.0 3.60e-01 72.7% 99.5%
223776 3115.4.1.1 a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 0.59 30.0 3.99e-01 90.6% 93.0%
5033281 304.100.1.1 a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS 0.58 28.0 3.83e-01 74.1% 95.4%
1688016 220.3.1.3 beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 0.58 53.0 4.60e-01 100.0% 91.3%
3519901 3369.1.1.0 beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 0.57 41.0 3.89e-01 74.8% 83.0%
3280259 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 28.0 3.56e-01 96.4% 79.5%
3726266 3363.1.1.0 beta sandwiches › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs 0.55 34.0 4.06e-01 73.4% 95.6%
3331566 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 30.0 3.27e-01 96.4% 62.6%
3896560 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.52 37.0 3.49e-01 93.5% 60.0%
3211117 304.112.1.0 a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.52 37.0 4.07e-01 74.8% 92.2%
3743741 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.50 31.0 3.80e-01 99.3% 98.8%
2034 12.3.1.2 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.50 35.0 2.49e-01 71.2% 70.7%
D2 medium residues 20-42_366-438
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24664.2 best Monjiviricetes_fusion 31.1 9.30e-08 76.0% 9.5%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 36.0 4.22e-01 85.4% 69.1%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.61 35.0 3.84e-01 85.4% 68.8%
2gumB01 2.30.30.1230 Mainly Beta › Roll › SH3 type barrels. › 0.59 53.0 5.26e-01 99.0% 97.0%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 31.0 3.57e-01 93.8% 77.6%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 32.0 3.80e-01 88.5% 89.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3485745 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 34.0 4.23e-01 85.4% 95.0%
3898952 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 35.0 3.89e-01 86.5% 77.3%
3529708 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 33.0 3.72e-01 87.5% 76.0%
3725260 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 33.0 3.84e-01 87.5% 82.9%
4001172 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.54 33.0 3.84e-01 86.5% 84.3%
3243188 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 34.0 3.86e-01 86.5% 84.0%
D3 medium residues 43-68_213-294
PDB
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 51.0 5.17e-01 82.4% 82.4%
3wyfE00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 50.0 4.60e-01 81.5% 61.3%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 45.0 4.38e-01 81.5% 67.5%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 33.0 4.16e-01 83.3% 93.2%
2vrwB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 45.0 4.33e-01 81.5% 68.6%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 4.43e-01 80.6% 82.9%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 42.0 4.45e-01 84.3% 80.4%
4gzuB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 42.0 4.52e-01 80.6% 84.6%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 46.0 4.06e-01 81.5% 66.9%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 46.0 4.43e-01 82.4% 71.9%
3f6zB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.60 39.0 4.48e-01 89.8% 91.1%
2dfkC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 46.0 4.24e-01 82.4% 67.4%
5u78C00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 45.0 4.43e-01 81.5% 85.3%
1dynA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 4.49e-01 82.4% 81.4%
5d3xB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 4.23e-01 86.1% 80.9%
1m9sA03 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.57 33.0 3.82e-01 77.8% 81.3%
7z6eA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 4.12e-01 80.6% 83.6%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.56 43.0 3.76e-01 82.4% 85.5%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 35.0 4.03e-01 82.4% 89.5%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.55 41.0 3.90e-01 79.6% 93.2%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 4.01e-01 78.7% 81.7%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.55 41.0 4.22e-01 79.6% 81.7%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 4.15e-01 81.5% 78.6%
1p5tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 41.0 4.18e-01 78.7% 81.1%
2z0qA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 4.06e-01 83.3% 78.9%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 43.0 3.94e-01 87.0% 96.0%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.53 38.0 4.10e-01 88.9% 90.9%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.62e-01 86.1% 84.4%
3v8uA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.53 40.0 3.71e-01 81.5% 95.7%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.52 34.0 4.00e-01 77.8% 100.0%
2r0lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 32.0 3.18e-01 93.5% 59.3%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 40.0 3.39e-01 84.3% 77.2%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.50 38.0 3.86e-01 92.6% 82.1%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081361 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 48.0 5.01e-01 78.7% 72.0%
4957336 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 45.0 2.97e-01 76.9% 17.0%
3619334 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 47.0 5.11e-01 80.6% 83.3%
3931164 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 53.0 5.23e-01 83.3% 87.0%
3231960 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.67 47.0 3.76e-01 79.6% 38.0%
1833801 220.1.1.25 beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.66 51.0 5.17e-01 82.4% 82.4%
3786604 220.1.1.244 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31261 0.64 45.0 4.28e-01 83.3% 61.6%
4322675 220.1.1.121 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.64 44.0 4.41e-01 86.1% 69.1%
3704470 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 49.0 4.53e-01 81.5% 78.6%
3498575 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.64 40.0 4.21e-01 80.6% 69.0%
4607576 4.1.1.370 beta barrels › SH3 › SH3 › SH3 › PF28261 0.64 40.0 4.79e-01 86.1% 97.1%
3227023 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 49.0 4.11e-01 82.4% 48.1%
3512614 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 48.0 4.76e-01 80.6% 78.3%
3797707 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 44.0 4.13e-01 82.4% 57.8%
3228052 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.63 50.0 4.36e-01 86.1% 84.7%
3939076 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.63 41.0 4.21e-01 82.4% 70.0%
3512851 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 47.0 4.38e-01 81.5% 70.4%
3273564 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 39.0 4.25e-01 79.6% 78.9%
3922536 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 4.19e-01 85.2% 58.1%
3859768 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 48.0 4.09e-01 85.2% 80.0%
1066050 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 45.0 4.39e-01 80.6% 81.1%
3263932 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 47.0 4.34e-01 85.2% 65.7%
3895387 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 45.0 4.41e-01 81.5% 74.8%
3859895 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.59 44.0 3.03e-01 81.5% 22.7%
4962251 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.59 45.0 4.20e-01 81.5% 71.9%
3730003 6.1.1.36 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › RNaseT2L_C 0.59 49.0 4.43e-01 91.7% 86.7%
5033778 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.59 43.0 4.27e-01 76.9% 93.8%
3479576 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 40.0 4.01e-01 84.3% 67.0%
3648015 9.1.1.21 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Cyclin_D1_bind 0.58 44.0 3.85e-01 81.5% 95.3%
3186506 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.58 45.0 3.15e-01 84.3% 25.8%
3787012 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 44.0 3.87e-01 82.4% 69.4%
4194151 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.58 33.0 3.52e-01 78.7% 64.4%
3592221 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 43.0 4.19e-01 83.3% 72.0%
3484225 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 46.0 3.62e-01 87.0% 93.2%
3478828 220.1.1.28 beta barrels › PH domain-like › PH domain-like › PH domain-like › hSac2 0.57 44.0 3.78e-01 82.4% 62.4%
3472673 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 44.0 4.05e-01 83.3% 70.7%
4636051 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.56 36.0 3.73e-01 79.6% 67.6%
4493566 1.1.5.26 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN 0.56 38.0 3.76e-01 73.1% 64.3%
3253267 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 34.0 3.73e-01 78.7% 77.6%
5033471 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.54 40.0 4.08e-01 77.8% 97.1%
1281147 9.23.1.1 beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › Lipocalin_3 0.54 34.0 3.62e-01 79.6% 72.3%
3286662 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.54 32.0 3.35e-01 80.6% 63.0%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.54 36.0 3.73e-01 79.6% 74.0%
5074343 319.1.1.23 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 0.53 28.0 3.24e-01 77.8% 72.0%
4980371 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 28.0 3.07e-01 77.8% 62.5%
5031493 319.1.1.23 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 0.52 27.0 3.17e-01 77.8% 69.2%
4418386 3775.1.1.2 beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › PorA 0.50 41.0 3.05e-01 90.7% 88.7%