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putative_glycoprotein

Euk-Vir

Hubei_chuvirus-like_virus_1

putative_glycoprotein__YP_009337905__Hubei_chuvirus-like_virus_1__1922857

Identity

Accession:
YP_009337905 ↗
Protein ID:
putative_glycoprotein
Kingdom:
euk

Quality

70.4 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Jingchuvirales› Chuviridae› Scarabeuvirus› Hubei_chuvirus-like_virus_1

TaxID: 1922857

Cluster

View cluster (20 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 74-219
PDB
Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24664.2 best Monjiviricetes_fusion 206.6 7.20e-61 100.0% 22.3%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.62 30.0 2.91e-01 74.7% 40.0%
3wmqA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 26.0 3.21e-01 74.7% 59.6%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 29.0 3.25e-01 95.9% 57.1%
3jxvA01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 34.0 3.75e-01 73.3% 72.4%
1cd9B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 25.0 3.00e-01 95.9% 58.2%
6qwrA01 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.55 41.0 3.73e-01 76.0% 95.8%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4960460 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 33.0 3.68e-01 95.9% 60.8%
3411669 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 32.0 3.61e-01 95.9% 62.7%
4955226 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 32.0 3.27e-01 96.6% 49.7%
3416828 10.32.1.188 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM181_GOLD 0.60 32.0 3.23e-01 74.0% 50.3%
3907540 10.32.1.188 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM181_GOLD 0.60 31.0 3.40e-01 74.7% 58.4%
3975660 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.57 41.0 3.64e-01 75.3% 94.4%
4032409 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 29.0 3.77e-01 97.3% 94.7%
3478357 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 31.0 3.24e-01 96.6% 57.8%
3510040 3115.3.1.2 ↗ a+b two layers › GP2-like › P56 › P56 › DUF2922 0.55 27.0 3.40e-01 98.6% 80.0%
3818855 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 41.0 3.91e-01 81.5% 94.3%
4993523 11.1.1.1412 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4382 0.50 27.0 3.25e-01 95.9% 80.0%
4663220 11.1.1.416 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SPC22 0.50 29.0 3.19e-01 97.3% 70.0%
3965794 304.133.1.1 ↗ a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.50 32.0 3.88e-01 99.3% 98.9%
D2 medium residues 29-60_353-396
PDB
Domain cluster: rep: putative_glycoprotein__YP_009337120__Hubei_rhabdo-like_virus_7__1923191__D42-60_350-394
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24664.2 best Monjiviricetes_fusion 48.1 6.50e-13 64.5% 7.3%
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1af5A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 40.0 3.38e-01 93.4% 35.7%
1ejcA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.63 39.0 2.84e-01 88.2% 22.6%
3l7yA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.61 37.0 3.31e-01 88.2% 42.2%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.61 39.0 3.85e-01 86.8% 61.0%
2dm7A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 37.0 3.51e-01 89.5% 52.3%
5jdjA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 38.0 3.58e-01 90.8% 52.7%
1fvqA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 37.0 3.84e-01 85.5% 65.3%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 40.0 3.92e-01 94.7% 64.2%
1waaC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 37.0 3.44e-01 89.5% 50.5%
1g1kA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 38.0 3.06e-01 90.8% 34.3%
3pucA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 37.0 3.40e-01 89.5% 49.0%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 41.0 4.17e-01 90.8% 73.3%
2wcoA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.59 31.0 2.74e-01 90.8% 32.2%
2rikA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 36.0 3.41e-01 89.5% 50.5%
2a38A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 36.0 3.39e-01 89.5% 50.0%
5iryA05 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.58 37.0 3.64e-01 90.8% 58.8%
2cxiA03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.58 38.0 3.92e-01 89.5% 71.4%
7ahsA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 36.0 3.49e-01 90.8% 54.5%
2cpcA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 36.0 3.43e-01 89.5% 54.0%
2y23A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 37.0 3.36e-01 90.8% 48.1%
2gjhA00 3.30.1070.20 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › 0.58 38.0 4.24e-01 90.8% 89.5%
2k1mA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 35.0 3.32e-01 89.5% 49.5%
3b43A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 36.0 3.31e-01 89.5% 49.5%
2bk8A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 36.0 3.37e-01 89.5% 50.5%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 36.0 3.29e-01 86.8% 47.6%
2cw8A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 39.0 2.99e-01 92.1% 32.0%
1x8bA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 40.0 3.90e-01 93.4% 66.7%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.56 36.0 3.40e-01 88.2% 53.3%
5dx9A01 3.30.70.1020 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 0.56 37.0 3.85e-01 86.8% 72.2%
5uv6A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 36.0 3.40e-01 89.5% 55.1%
4ae5C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 42.0 3.32e-01 94.7% 38.6%
3rpiB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.67e-01 89.5% 59.2%
4lowA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.55 37.0 3.66e-01 92.1% 64.3%
2fyxA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.55 38.0 3.21e-01 88.2% 42.3%
2dltA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 34.0 3.07e-01 90.8% 45.3%
4qmfD02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.54 38.0 3.65e-01 86.8% 62.0%
5ghrA02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.54 35.0 3.07e-01 89.5% 40.8%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.54 36.0 3.38e-01 88.2% 55.3%
2j0wA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 34.0 3.50e-01 88.2% 65.3%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 36.0 3.61e-01 89.5% 67.5%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.40e-01 88.2% 58.9%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.53 38.0 3.73e-01 86.8% 68.7%
3va7A05 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 36.0 3.35e-01 89.5% 54.0%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 36.0 3.10e-01 96.1% 41.7%
4limA00 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.52 46.0 2.95e-01 100.0% 93.7%
7y9aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 33.0 3.23e-01 90.8% 57.5%
1gx5A03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.52 39.0 3.45e-01 94.7% 52.5%
2qv6B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.52 39.0 3.36e-01 89.5% 50.8%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 35.0 3.44e-01 92.1% 63.5%
7e6gA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.51 43.0 3.49e-01 94.7% 49.7%
1g71A01 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.51 42.0 3.04e-01 94.7% 55.5%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.50 32.0 3.28e-01 90.8% 65.3%
4fa8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 42.0 3.78e-01 90.8% 66.3%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3325883 387.1.5.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.73 42.0 4.88e-01 90.8% 80.0%
3344177 387.1.5.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.68 40.0 4.87e-01 86.8% 100.0%
5031556 4955.1.1.0 ↗ a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.63 40.0 3.96e-01 89.5% 61.3%
4993423 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.62 42.0 4.22e-01 94.7% 69.3%
5079841 3501.1.1.0 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.62 38.0 3.89e-01 90.8% 62.7%
5082595 304.8.1.10 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.62 39.0 4.20e-01 88.2% 75.4%
5033418 3501.1.1.0 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.62 38.0 3.93e-01 89.5% 65.7%
4964402 3501.1.1.0 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.60 37.0 3.86e-01 92.1% 64.3%
4118092 304.28.1.4 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.60 41.0 4.13e-01 88.2% 70.7%
5027967 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.60 41.0 4.01e-01 90.8% 64.7%
4974273 3501.1.1.0 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.59 35.0 3.69e-01 92.1% 62.9%
4939665 304.120.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.59 38.0 3.88e-01 90.8% 66.7%
4771134 327.3.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain 0.58 38.0 4.29e-01 90.8% 92.7%
3488300 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.58 37.0 3.36e-01 90.8% 47.6%
3590297 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 39.0 3.57e-01 85.5% 53.0%
3742864 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 38.0 3.45e-01 93.4% 48.2%
3931130 4300.1.1.0 ↗ beta complex topology › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like 0.57 50.0 4.05e-01 100.0% 54.7%
4502232 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.57 39.0 3.84e-01 90.8% 66.3%
4242475 304.28.1.4 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.57 40.0 4.01e-01 88.2% 71.2%
3179975 327.11.2.44 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF28723 0.57 36.0 3.64e-01 89.5% 64.0%
3762662 328.8.1.2 ↗ a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › B3R 0.56 42.0 3.64e-01 92.1% 51.3%
5016597 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.56 40.0 3.59e-01 92.1% 53.3%
5261 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.56 39.0 3.70e-01 94.7% 60.4%
4115819 304.48.1.48 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 0.56 43.0 3.37e-01 94.7% 37.6%
4946181 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.55 38.0 3.34e-01 93.4% 45.8%
1175882 304.154.1.1 ↗ a+b two layers › Alpha-beta plaits › Regulator of polyketide synthase expression N-terminal domain › Regulator of polyketide synthase expression N-terminal domain › GGDEF_2 0.55 40.0 3.20e-01 94.7% 38.6%
3972989 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.55 39.0 3.58e-01 92.1% 57.0%
3670277 3012.1.1.1 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.55 36.0 3.67e-01 86.8% 68.0%
5579 306.8.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › TM1457-like › TM1457-like › Peptidase_Prp 0.54 36.0 3.38e-01 88.2% 55.3%
3360104 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 37.0 3.47e-01 94.7% 57.0%
3286883 2003.1.5.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.53 44.0 3.13e-01 94.7% 45.7%
3238197 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.52 44.0 3.38e-01 94.7% 79.4%
3387496 3019.1.1.1 ↗ beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN 0.52 42.0 3.83e-01 88.2% 76.0%
3602746 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 35.0 3.47e-01 90.8% 68.8%
80936 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.51 42.0 3.29e-01 94.7% 74.9%
4460828 3618.1.1.1 ↗ beta complex topology › Flagellin beta sheet domain › Flagellin beta sheet domain › Flagellin beta sheet domain › Flagellin_IN 0.50 43.0 3.85e-01 93.4% 70.5%
4598614 304.48.1.22 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III 0.50 37.0 3.29e-01 92.1% 51.7%
D3 medium residues 61-73_231-352
PDB
Domain cluster: rep: putative_glycoprotein__YP_009337120__Hubei_rhabdo-like_virus_7__1923191__D240-338
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24664.2 best Monjiviricetes_fusion 155.9 1.60e-45 98.5% 18.2%
D4 medium residues 397-461
PDB
Domain cluster: rep: glycoprotein__YP_009666281__Drosophila_unispina_virus_1__1802951__D393-466
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24664.2 best Monjiviricetes_fusion 82.5 2.60e-23 100.0% 9.8%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gumB01 2.30.30.1230 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.04e-01 100.0% 83.0%
4gp0B02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 41.0 3.49e-01 89.2% 84.6%
2lleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 40.0 2.88e-01 89.2% 42.7%
3o8sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 40.0 3.30e-01 92.3% 86.6%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 2.82e-01 98.5% 92.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4279904 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.58 42.0 2.82e-01 80.0% 37.1%
4989647 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.52 33.0 3.63e-01 76.9% 78.2%
4996925 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 37.0 2.57e-01 83.1% 68.0%