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putative_glycoprotein_precursor

Euk-Vir

Emaravirus_fici

putative_glycoprotein_precursor__YP_009237272__Emaravirus_fici__1980427

Identity

Accession:
YP_009237272 ↗
Protein ID:
putative_glycoprotein_precursor
Kingdom:
euk

Quality

71.6 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Fimoviridae› Emaravirus› Emaravirus_fici

TaxID: 1980427

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-85
PDB
Domain cluster: rep: glycoprotein__YP_010088072__Emaravirus_kiwii__2660760__D42-90
D2 high residues 94-187
PDB
D3 high residues 461-545
PDB
Domain cluster: rep: putative_glycoprotein_precursor__YP_010088066__Emaravirus_cordylinae__2099567__D574-632
D4 medium residues 196-247_309-398_424-460
PDB
Domain cluster: rep: E1_protein__NP_740661__Sleeping_disease_virus__78540__D1-45_130-191_222-309
D5 medium residues 248-308_399-423
PDB
Domain cluster: rep: glycoprotein_precursor__YP_009237265__Emaravirus_idaeobati__1980431__D263-335
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mc0A01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.57 43.0 3.55e-01 81.4% 75.3%
1mjfB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 43.0 3.24e-01 87.2% 85.3%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.54 36.0 3.52e-01 70.9% 71.0%
3r8jA00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.53 43.0 3.44e-01 90.7% 51.1%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.53 40.0 3.33e-01 82.6% 77.9%
6qmmA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 41.0 3.13e-01 87.2% 84.5%
1inlD01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 42.0 3.17e-01 88.4% 83.5%
1ykdB01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 38.0 3.08e-01 81.4% 68.9%
1jyhA00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.51 42.0 3.50e-01 90.7% 80.6%
3o4fH02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 40.0 3.07e-01 87.2% 84.4%
2k31A00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 38.0 3.24e-01 81.4% 86.6%
3rkxA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 44.0 3.40e-01 97.7% 87.5%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1286476 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.58 44.0 3.57e-01 81.4% 72.7%
4027412 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.58 44.0 3.57e-01 81.4% 75.2%
6845 223.1.1.23 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 0.57 43.0 3.38e-01 81.4% 63.6%
136833 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.56 42.0 3.34e-01 81.4% 63.4%
3274454 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.56 42.0 2.59e-01 82.6% 28.8%
3476829 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.56 42.0 3.22e-01 81.4% 76.2%
3703618 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.55 38.0 3.74e-01 93.0% 66.3%
3699769 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.55 40.0 3.16e-01 79.1% 62.1%
3548987 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.54 40.0 3.32e-01 81.4% 71.2%
3550323 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.53 40.0 2.63e-01 82.6% 93.9%
4173837 304.38.1.1 ↗ a+b two layers › Alpha-beta plaits › Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain › Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain › PyrI 0.52 40.0 3.83e-01 82.6% 79.0%
4600946 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 40.0 3.15e-01 84.9% 70.8%
3540937 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.52 39.0 3.01e-01 80.2% 69.0%
3471644 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.52 39.0 2.56e-01 82.6% 31.2%
4169399 304.14.1.1 ↗ a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.51 41.0 4.26e-01 86.0% 100.0%