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putative_gp76-like_protein
Euk-VirEsparto_virus
putative_gp76-like_protein__YP_009551759__Esparto_virus__2072209
Identity
- Accession:
- YP_009551759 ↗
- Protein ID:
- putative_gp76-like_protein
- Kingdom:
- euk
Quality
53.8
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-94
D2
high
residues 135-218
D3
high
residues 397-480
D4
medium
residues 237-291
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 48.0 | 4.28e-01 | 89.1% | 83.5% |
| 4o7iA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.57 | 39.0 | 2.75e-01 | 72.7% | 83.5% |
| 1zzgA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.55 | 43.0 | 3.16e-01 | 87.3% | 48.5% |
| 3iayA06 | 6.10.140.1540 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 29.0 | 3.47e-01 | 72.7% | 76.3% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 42.0 | 3.86e-01 | 92.7% | 87.7% |
| 1vrmA02 | 1.10.3980.10 | Mainly Alpha › Orthogonal Bundle › T-fold › ApbE-like superfamily | 0.54 | 38.0 | 3.27e-01 | 78.2% | 91.1% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 3.87e-01 | 92.7% | 98.6% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 3.68e-01 | 90.9% | 81.4% |
| 3ubhA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 42.0 | 3.56e-01 | 90.9% | 66.3% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 41.0 | 2.86e-01 | 94.5% | 58.1% |
| 1vs5D02 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.51 | 37.0 | 3.32e-01 | 85.5% | 85.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3987015 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.58 | 45.0 | 4.24e-01 | 94.5% | 90.7% |
| 4551219 | 3236.2.1.6 ↗ | alpha complex topology › Cation-proton antiporter › Sodium-dependent citrate symporter › Sodium-dependent citrate symporter › OAD_beta | 0.57 | 41.0 | 2.64e-01 | 85.5% | 57.5% |
| 3372020 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.56 | 39.0 | 3.55e-01 | 87.3% | 52.5% |
| 3707609 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.54 | 42.0 | 3.74e-01 | 85.5% | 78.8% |
| 4937874 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.53 | 41.0 | 3.99e-01 | 90.9% | 90.8% |
| 3289767 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 43.0 | 3.88e-01 | 98.2% | 82.5% |
| 3238575 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.62e-01 | 98.2% | 61.9% |
D5
medium
residues 292-395