putative_helicase

Euk-Vir

Grapevine_deformation_virus

putative_helicase__YP_006347729__Grapevine_deformation_virus__233784

Identity

64.0 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 262-348

PDB

Domain cluster: rep: NTP-binding_domain__YP_054440__Arabis_mosaic_virus__12271__D272-349

D2 high residues 359-568

PDB

Domain cluster: rep: replication_associated_protein__YP_009345107__Amphibola_crenata_associated_bacilladnavirus_1__1941435__D302-478

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00910.29 best	RNA_helicase	101.3	5.70e-29	50.0%	100.0%

D3 high residues 575-727

PDB

Domain cluster: rep: NTP-binding_protein__YP_008877667__Lamium_mild_mosaic_virus__1432135__D374-519

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1nr4C00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.53	21.0	3.12e-01	95.4%	81.8%
1icwB00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.52	24.0	3.51e-01	96.1%	100.0%
1eqtA00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.52	20.0	2.95e-01	92.2%	79.1%
3hr8A02	3.30.250.10	Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain	0.51	24.0	3.22e-01	91.5%	88.0%
2mp1A00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.51	23.0	3.12e-01	98.7%	83.1%
2hbpA00	2.30.30.700	Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1	0.50	23.0	3.09e-01	86.3%	89.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3464671	4.1.1.136 ↗	beta barrels › SH3 › SH3 › SH3 › NMD_SH3	0.55	25.0	3.44e-01	79.7%	88.6%
4164648	4263.2.1.1 ↗	a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext	0.54	22.0	3.13e-01	95.4%	80.0%

D4 medium residues 1-176_190-214_753-795

PDB